C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12193
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117250 Gm12193-001 ENSMUSG00000081934 10090 + 11:49776499-49776877 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117250
Transcript ID Adipose Bladder Brain Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117250 0.163±0.00 0.150±0.08 0.054±0.02 0.230±0.08 0.069±0.00 0.373±0.11 0.206±0.00 0.586±0.31 0.023±0.00 0.564±0.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 244
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 231
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 211
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 209
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 209
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 222
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 2e-37 159
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 244
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 244
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 243
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 244
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 3e-31 139
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 4e-31 139
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 209
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 3.9937e-43 178
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.000000005 66
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 215
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 244
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 244
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 9.94922e-44 180

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