C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463466 RP11-874G11.1-001 ENSG00000244712 9606 - 12:28564678-28565141 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyMuscleOvaryTestisENST00000463466
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Muscle Ovary Testis
ENST00000463466 0.038±0.00 0.164±0.00 0.044±0.00 0.173±0.00 0.119±0.00 0.036±0.00 0.124±0.00 0.105±0.00 0.254±0.01 0.279±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056O CIL_00056O_0001 CGP 12:27958084-28581511
CIL_00056N CIL_00056N_0001 CGP 12:28133249-29340980

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077493 Gm8412-001 processed_pseudogene Mus_musculus 0 268
ENSMUST00000116054 Gm11271-001 processed_pseudogene Mus_musculus 0 255
ENSMUST00000121282 Gm12508-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000119801 Gm11955-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000117685 Gm11270-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000117972 Gm8482-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000059802 Rpl29-002 protein_coding Mus_musculus 0 248
ENSMUST00000150576 Rpl29-001 protein_coding Mus_musculus 0 248
ENSMUST00000163749 Gm17669-201 protein_coding Mus_musculus 0 248
ENSMUST00000118562 Gm12987-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000075962 Gm6344-001 processed_pseudogene Mus_musculus 0 241
ENSMUST00000147424 4931440P22Rik-003 processed_transcript Mus_musculus 0 241
ENSMUST00000128641 Uimc1-003 retained_intron Mus_musculus 0 241
ENSMUST00000120700 Gm12723-001 processed_pseudogene Mus_musculus 0 239
ENSMUST00000119110 Gm12447-001 processed_pseudogene Mus_musculus 0 237
ENSMUST00000120287 Gm11533-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000118829 Gm13841-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000118248 Gm14036-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000178557 Gm8210-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000179718 Gm15454-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000098994 Gm10709-201 protein_coding Mus_musculus 0 235
ENSMUST00000086508 Rpl29-ps2-201 processed_pseudogene Mus_musculus 0 230
ENSMUST00000091759 Gm7731-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000133732 Gm10913-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000119175 Gm11449-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000121784 Gm13586-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000178932 Gm5561-201 processed_pseudogene Mus_musculus 0 219
ENSMUST00000080945 Gm6887-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000119668 Gm13213-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000119789 Gm12704-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000164794 Rpl29-ps5-201 processed_pseudogene Mus_musculus 0 213
ENSMUST00000105038 Gm3550-201 protein_coding Mus_musculus 0 213
ENSMUST00000075152 Gm4945-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000165672 Gm10548-002 transcribed_processed_pseudogene Mus_musculus 0 204
ENSMUST00000097631 Gm10548-001 transcribed_processed_pseudogene Mus_musculus 0 204
ENSMUST00000160295 Gm8580-001 processed_pseudogene Mus_musculus 0 204
ENSMUST00000172270 Gm5218-201 protein_coding Mus_musculus 0 204
ENSMUST00000122403 Gm15212-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000176181 Gm20702-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000120582 Gm15467-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000119044 Gm13545-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000112504 Gm15526-001 processed_pseudogene Mus_musculus 1.4013e-45 187
ENSMUST00000117417 Gm13141-001 processed_pseudogene Mus_musculus 2.8026e-45 185
ENSMUST00000188361 RP23-299M19.2-001 processed_pseudogene Mus_musculus 9.94922e-44 180
ENSMUST00000117250 Gm12193-001 processed_pseudogene Mus_musculus 2e-37 159
ENSMUST00000161107 Gm16298-001 processed_pseudogene Mus_musculus 8e-36 154
ENSMUST00000118333 Gm12937-001 processed_pseudogene Mus_musculus 1e-34 150
ENSMUST00000161849 Rpl29-ps1-001 processed_pseudogene Mus_musculus 3e-30 135
ENSMUST00000123226 Ptch2-003 retained_intron Mus_musculus 2e-17 94
ENSMUST00000121117 Gm14463-001 processed_pseudogene Mus_musculus 8e-16 88
ENSMUST00000118520 Gm11926-001 processed_pseudogene Mus_musculus 0.00000000008 71

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