C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000442089 RP5-1057J7.1-001 ENSG00000215381 9606 + 1:23244765-23245224 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000442089
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000442089 0.314±0.00 0.097±0.00 0.054±0.00 0.316±0.00 0.434±0.00 0.044±0.00 0.051±0.00 0.088±0.00 0.449±0.00 0.473±0.00 0.072±0.00 0.181±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059802 Rpl29-002 protein_coding Mus_musculus 0 320
ENSMUST00000150576 Rpl29-001 protein_coding Mus_musculus 0 320
ENSMUST00000118248 Gm14036-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000075962 Gm6344-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000118562 Gm12987-001 processed_pseudogene Mus_musculus 0 307
ENSMUST00000118829 Gm13841-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000178557 Gm8210-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000179718 Gm15454-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000098994 Gm10709-201 protein_coding Mus_musculus 0 303
ENSMUST00000128641 Uimc1-003 retained_intron Mus_musculus 0 302
ENSMUST00000119110 Gm12447-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000133732 Gm10913-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000119175 Gm11449-001 processed_pseudogene Mus_musculus 0 296
ENSMUST00000119789 Gm12704-001 processed_pseudogene Mus_musculus 0 292
ENSMUST00000121282 Gm12508-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000086508 Rpl29-ps2-201 processed_pseudogene Mus_musculus 0 287
ENSMUST00000077493 Gm8412-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000120287 Gm11533-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000075321 Gm4889-201 protein_coding Mus_musculus 0 285
ENSMUST00000119801 Gm11955-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000178932 Gm5561-201 processed_pseudogene Mus_musculus 0 281
ENSMUST00000119668 Gm13213-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000163749 Gm17669-201 protein_coding Mus_musculus 0 281
ENSMUST00000176181 Gm20702-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000105038 Gm3550-201 protein_coding Mus_musculus 0 276
ENSMUST00000172270 Gm5218-201 protein_coding Mus_musculus 0 265
ENSMUST00000112504 Gm15526-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000119044 Gm13545-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000075152 Gm4945-001 processed_pseudogene Mus_musculus 0 250
ENSMUST00000117417 Gm13141-001 processed_pseudogene Mus_musculus 0 246
ENSMUST00000122403 Gm15212-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000117250 Gm12193-001 processed_pseudogene Mus_musculus 0 209
ENSMUST00000188361 RP23-299M19.2-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000161849 Rpl29-ps1-001 processed_pseudogene Mus_musculus 9.94922e-44 180
ENSMUST00000118333 Gm12937-001 processed_pseudogene Mus_musculus 3e-30 135
ENSMUST00000118520 Gm11926-001 processed_pseudogene Mus_musculus 8e-16 88

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