C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480306 RPL29-004 ENSG00000162244 9606 - 3:51993628-51995881 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059802 Rpl29-002 protein_coding Mus_musculus 0 231
ENSMUST00000150576 Rpl29-001 protein_coding Mus_musculus 0 231
ENSMUST00000121617 Gm12340-001 unprocessed_pseudogene Mus_musculus 0 220
ENSMUST00000118829 Gm13841-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000178557 Gm8210-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000075962 Gm6344-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000118248 Gm14036-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000179718 Gm15454-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000098994 Gm10709-201 protein_coding Mus_musculus 0 215
ENSMUST00000105038 Gm3550-201 protein_coding Mus_musculus 0 200
ENSMUST00000133732 Gm10913-001 processed_pseudogene Mus_musculus 0 198
ENSMUST00000075321 Gm4889-201 protein_coding Mus_musculus 0 198
ENSMUST00000128641 Uimc1-003 retained_intron Mus_musculus 0 196
ENSMUST00000077493 Gm8412-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000172270 Gm5218-201 protein_coding Mus_musculus 1.4013e-45 187
ENSMUST00000112504 Gm15526-001 processed_pseudogene Mus_musculus 2e-39 167
ENSMUST00000086508 Rpl29-ps2-201 processed_pseudogene Mus_musculus 2e-39 167
ENSMUST00000120582 Gm15467-001 processed_pseudogene Mus_musculus 6e-39 165
ENSMUST00000178932 Gm5561-201 processed_pseudogene Mus_musculus 7e-38 161
ENSMUST00000119175 Gm11449-001 processed_pseudogene Mus_musculus 7e-38 161
ENSMUST00000147424 4931440P22Rik-003 processed_transcript Mus_musculus 7e-38 161
ENSMUST00000119044 Gm13545-001 processed_pseudogene Mus_musculus 3e-37 159
ENSMUST00000116054 Gm11271-001 processed_pseudogene Mus_musculus 3e-37 159
ENSMUST00000120287 Gm11533-001 processed_pseudogene Mus_musculus 3e-36 156
ENSMUST00000117417 Gm13141-001 processed_pseudogene Mus_musculus 3e-36 156
ENSMUST00000119668 Gm13213-001 processed_pseudogene Mus_musculus 3e-36 156
ENSMUST00000119789 Gm12704-001 processed_pseudogene Mus_musculus 1e-35 154
ENSMUST00000163749 Gm17669-201 protein_coding Mus_musculus 4e-35 152
ENSMUST00000118562 Gm12987-001 processed_pseudogene Mus_musculus 2e-34 150
ENSMUST00000075152 Gm4945-001 processed_pseudogene Mus_musculus 2e-34 150
ENSMUST00000119110 Gm12447-001 processed_pseudogene Mus_musculus 6e-34 148
ENSMUST00000121282 Gm12508-001 processed_pseudogene Mus_musculus 6e-34 148
ENSMUST00000117250 Gm12193-001 processed_pseudogene Mus_musculus 3e-31 139
ENSMUST00000122403 Gm15212-001 processed_pseudogene Mus_musculus 3e-31 139
ENSMUST00000118333 Gm12937-001 processed_pseudogene Mus_musculus 1e-30 137
ENSMUST00000186887 RP23-186M2.2-001 processed_pseudogene Mus_musculus 3e-27 126
ENSMUST00000119801 Gm11955-001 processed_pseudogene Mus_musculus 1e-26 124
ENSMUST00000188361 RP23-299M19.2-001 processed_pseudogene Mus_musculus 1e-25 121
ENSMUST00000176181 Gm20702-001 processed_pseudogene Mus_musculus 3e-17 94
ENSMUST00000161849 Rpl29-ps1-001 processed_pseudogene Mus_musculus 1e-16 92
ENSDART00000111140 RPL29-201 protein_coding Danio_rerio 0.000000000000001 88
ENSMUST00000118520 Gm11926-001 processed_pseudogene Mus_musculus 0.000000000003 77

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