C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7831
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117990 Gm7831-001 ENSMUSG00000083226 10090 + 16:90915180-90915731 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyMuscleOvaryPlacentaTestisENSMUST00000117990
Transcript ID Adipose Brain Kidney Muscle Ovary Placenta Testis
ENSMUST00000117990 0.100±0.00 0.105±0.06 0.108±0.00 0.056±0.00 0.463±0.30 0.123±0.09 0.132±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069
CIL_00087M CIL_00087M_0002 VISTA 16:90839145-91442270
CIL_0009BQ CIL_0009BQ_0002 VISTA 16:90840152-91441411

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 0 387
ENST00000429025 CTA-440B3.1-001 processed_pseudogene Homo_sapiens 0 252
ENST00000429934 RP11-383F6.1-001 processed_pseudogene Homo_sapiens 0 320
ENST00000444020 RP11-1029M24.1-001 processed_pseudogene Homo_sapiens 0 431
ENST00000446498 RP3-476K8.4-001 processed_pseudogene Homo_sapiens 0 449
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 422
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 418
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 466
ENST00000475372 RPL17P44-001 processed_pseudogene Homo_sapiens 0 414
ENST00000483964 RP11-7F18.1-001 processed_pseudogene Homo_sapiens 0 366
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 484
ENST00000511559 RP11-115A14.1-001 processed_pseudogene Homo_sapiens 0 195
ENST00000560214 RP11-14C10.2-001 processed_pseudogene Homo_sapiens 9e-37 158

Loading