C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15798
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120082 Gm15798-001 ENSMUSG00000083658 10090 - 16:18944258-18944665 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000120082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000120082 0.344±0.06 1.297±0.91 0.175±0.02 0.389±0.14 0.477±0.21 0.410±0.11 0.260±0.01 0.426±0.16 0.236±0.12 0.485±0.19 0.206±0.11 0.405±0.14 0.334±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005F0 CIL_0005F0_0002 CGP 16:18836584-18956247

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0 390
ENST00000448912 AC104076.2-001 processed_pseudogene Homo_sapiens 0 294
ENST00000469428 RPL27AP5-001 processed_pseudogene Homo_sapiens 0 335
ENST00000492974 RP11-475C16.1-001 processed_pseudogene Homo_sapiens 0 374
ENST00000524496 RPL27A-007 protein_coding Homo_sapiens 0 390
ENST00000526562 RPL27A-009 protein_coding Homo_sapiens 0 357
ENST00000530022 RPL27A-008 protein_coding Homo_sapiens 0 390
ENST00000530913 RPL27A-011 protein_coding Homo_sapiens 0 357
ENST00000531978 RPL27A-004 protein_coding Homo_sapiens 0 226
ENST00000534599 RPL27A-005 nonsense_mediated_decay Homo_sapiens 0 390

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