C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000448912 AC104076.2-001 ENSG00000236667 9606 - 2:180938830-180939298 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENST00000448912
Transcript ID Brain
ENST00000448912 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C2 CIL_0004C2_0002 CGP 2:179944876-181076585

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077389 Gm7536-201 protein_coding Mus_musculus 0 407
ENSMUST00000170338 RP23-323H18.3-001 processed_pseudogene Mus_musculus 0 407
ENSMUST00000084017 Gm5908-201 processed_pseudogene Mus_musculus 0 407
ENSMUST00000143107 Rpl27a-001 protein_coding Mus_musculus 0 407
ENSMUST00000075382 Rpl27a-ps1-201 processed_pseudogene Mus_musculus 0 385
ENSMUST00000122360 Gm13981-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000117531 Gm14044-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000080866 Gm5453-201 processed_pseudogene Mus_musculus 0 374
ENSMUST00000053298 Rpl27a-005 retained_intron Mus_musculus 0 372
ENSMUST00000118191 Gm8213-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000084199 Gm6378-201 processed_pseudogene Mus_musculus 0 337
ENSMUST00000121260 Gm14407-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000122320 Gm14439-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000117666 Gm12218-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000122416 Gm15727-001 processed_pseudogene Mus_musculus 0 305
ENSMUST00000120082 Gm15798-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000156921 Rpl27a-003 nonsense_mediated_decay Mus_musculus 0 261

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