C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5270
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121506 Gm5270-001 ENSMUSG00000081099 10090 - 2:161254456-161255457 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000121506
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000121506 0.052±0.02 0.052±0.00 0.062±0.02 0.220±0.20 0.106±0.02 0.052±0.02 0.066±0.04 0.148±0.02 0.108±0.00 0.158±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004E5 CIL_0004E5_0002 CGP 2:160946978-162661147

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1055
ENST00000328713 GAPDHP24-001 processed_pseudogene Homo_sapiens 0 518
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 817
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1035
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1055
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1055
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 830
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 793
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 852
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 771
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 285
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 614
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 761
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 933
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 800
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 652
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 521
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 654
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 701
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 568
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 582
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 566
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 499
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1007
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 484
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 817
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 817
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 763
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 787
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 835
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 590
ENST00000511530 GAPDHP71-001 processed_pseudogene Homo_sapiens 0 797
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 403
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 773
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 813
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 508
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 737
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 942

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