| Transcript ID | Brain | Colon | Placenta |
|---|---|---|---|
| ENSMUST00000123063 | 24.091±7.14 | 0.554±0.16 | 0.063±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | paired box 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000123063  |
Pax6-003 |
ENSMUSG00000027168 |
10090 | + |
2:105668920-105696462  |
processed_transcript |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00096J | CIL_00096J_0002 | VISTA | 2:105147292-105748402 |
| CIL_0007PY | CIL_0007PY_0002 | VISTA | 2:105215855-105816711 |
| CIL_0007JA | CIL_0007JA_0005 | UCNEbase | 2:105301487-106575818 |
| CIL_000914 | CIL_000914_0002 | VISTA | 2:105311041-105914025 |
| CIL_00017T | CIL_00017T_0002 | CGP | 2:105386291-105697364 |
| CIL_0007XG | CIL_0007XG_0002 | VISTA | 2:105389599-105991449 |
| CIL_0008UP | CIL_0008UP_0002 | VISTA | 2:105418757-106020536 |
| CIL_0007UQ | CIL_0007UQ_0002 | VISTA | 2:105478530-106080039 |
| CIL_0008KI | CIL_0008KI_0002 | VISTA | 2:105533387-106134697 |
| CIL_00096G | CIL_00096G_0002 | VISTA | 2:105613336-106214486 |
| CIL_0000ZD | CIL_0000ZD_0002 | CGP | 2:105668900-105904564 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000241001
|
PAX6-002 | protein_coding | Homo_sapiens | 0 | 1096 |
|
ENST00000379107
|
PAX6-011 | protein_coding | Homo_sapiens | 0 | 1116 |
|
ENST00000379109
|
PAX6-004 | protein_coding | Homo_sapiens | 0 | 1090 |
|
ENST00000379111
|
PAX6-005 | protein_coding | Homo_sapiens | 0 | 1096 |
|
ENST00000379115
|
PAX6-001 | protein_coding | Homo_sapiens | 0 | 1096 |
|
ENST00000379123
|
PAX6-003 | protein_coding | Homo_sapiens | 0 | 1096 |
|
ENST00000379129
|
PAX6-009 | protein_coding | Homo_sapiens | 0 | 1116 |
|
ENST00000379132
|
PAX6-008 | protein_coding | Homo_sapiens | 0 | 1116 |
|
ENST00000419022
|
PAX6-201 | protein_coding | Homo_sapiens | 0 | 1116 |
|
ENST00000464174
|
PAX6-010 | retained_intron | Homo_sapiens | 0 | 1247 |
|
ENST00000470027
|
PAX6-006 | retained_intron | Homo_sapiens | 0 | 1090 |
|
ENST00000471303
|
PAX6-014 | processed_transcript | Homo_sapiens | 0 | 274 |
|
ENST00000474783
|
PAX6-017 | retained_intron | Homo_sapiens | 0 | 335 |
|
ENST00000494377
|
PAX6-007 | retained_intron | Homo_sapiens | 0 | 1090 |
|
ENST00000530373
|
PAX6-028 | processed_transcript | Homo_sapiens | 0 | 691 |
|
ENST00000531910
|
PAX6-027 | processed_transcript | Homo_sapiens | 0 | 584 |
|
ENST00000532175
|
PAX6-023 | retained_intron | Homo_sapiens | 1e-29 | 134 |
|
ENST00000532916
|
PAX6-030 | retained_intron | Homo_sapiens | 0 | 518 |
|
ENST00000533333
|
PAX6-019 | retained_intron | Homo_sapiens | 0 | 1090 |
|
ENST00000606377
|
PAX6-202 | protein_coding | Homo_sapiens | 0 | 1116 |
