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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RNA binding motif protein 39 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000135274  |
Rbm39-017 |
ENSMUSG00000027620 |
10090 | - |
2:156161831-156165212  |
retained_intron |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008EI | CIL_0008EI_0002 | VISTA | 2:155562263-156164147 |
| CIL_0000WY | CIL_0000WY_0002 | CGP | 2:156144039-156180238 |
| CIL_0000X2 | CIL_0000X2_0002 | CGP | 2:156147239-156309952 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000253363
|
RBM39-002 | protein_coding | Homo_sapiens | 0 | 590 |
|
ENST00000338163
|
RBM39-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 590 |
|
ENST00000361162
|
RBM39-001 | protein_coding | Homo_sapiens | 0 | 590 |
|
ENST00000374038
|
RBM39-020 | protein_coding | Homo_sapiens | 0 | 399 |
|
ENST00000397254
|
RP6-218J18.2-001 | processed_pseudogene | Homo_sapiens | 0 | 518 |
|
ENST00000403542
|
RBM39-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 590 |
|
ENST00000412738
|
RBM39-017 | nonsense_mediated_decay | Homo_sapiens | 0 | 379 |
|
ENST00000429968
|
RBM39-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 590 |
|
ENST00000444878
|
RBM39-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 590 |
|
ENST00000448303
|
RBM39-035 | protein_coding | Homo_sapiens | 0 | 590 |
|
ENST00000461283
|
RBM39-009 | retained_intron | Homo_sapiens | 0 | 590 |
|
ENST00000463004
|
RBM39-004 | retained_intron | Homo_sapiens | 0 | 590 |
|
ENST00000490484
|
RBM39-036 | retained_intron | Homo_sapiens | 0 | 527 |
|
ENST00000492779
|
RBM39-010 | retained_intron | Homo_sapiens | 0 | 590 |
|
ENST00000494274
|
RBM39-040 | processed_transcript | Homo_sapiens | 0 | 475 |
|
ENST00000528062
|
RBM39-015 | protein_coding | Homo_sapiens | 0 | 590 |
|
ENST00000615771
|
RBM39-047 | processed_transcript | Homo_sapiens | 2e-33 | 147 |
