C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L13A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152970 Rpl13a-003 ENSMUSG00000074129 10090 - 7:45125922-45128649 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391857 RPL13A-001 protein_coding Homo_sapiens 1e-23 115
ENST00000439189 RPL13AP5-001 processed_pseudogene Homo_sapiens 2e-22 110
ENST00000467825 RPL13A-009 protein_coding Homo_sapiens 5e-24 115
ENST00000472481 RPL13A-007 retained_intron Homo_sapiens 6e-24 115
ENST00000476268 RPL13A-003 retained_intron Homo_sapiens 1e-29 135
ENST00000477613 RPL13A-008 processed_transcript Homo_sapiens 4e-26 122
ENST00000478813 RP11-941H19.1-001 processed_pseudogene Homo_sapiens 4e-20 102
ENST00000479992 RPL13A-006 retained_intron Homo_sapiens 9e-28 128
ENST00000484279 RPL13A-004 nonsense_mediated_decay Homo_sapiens 8e-23 111
ENST00000486930 RPL13A-005 retained_intron Homo_sapiens 3e-26 122
ENST00000487479 RPL13AP3-001 transcribed_processed_pseudogene Homo_sapiens 0 279
ENST00000488946 RPL13A-002 retained_intron Homo_sapiens 1e-29 135
ENST00000494676 RPL13AP3-002 processed_transcript Homo_sapiens 0 300
ENST00000534211 RP11-140L24.3-001 processed_pseudogene Homo_sapiens 1e-29 134
ENST00000624069 RPL13A-013 nonsense_mediated_decay Homo_sapiens 9e-24 115

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