C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8837
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161037 Gm8837-001 ENSMUSG00000090099 10090 + 6:131130796-131132680 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161037
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161037 0.043±0.02 0.209±0.11 0.016±0.00 0.033±0.04 0.036±0.01 0.033±0.01 0.039±0.01 0.016±0.01 0.060±0.01 0.016±0.00 0.454±0.31 0.060±0.03 0.074±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253363 RBM39-002 protein_coding Homo_sapiens 0 693
ENST00000338163 RBM39-008 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000361162 RBM39-001 protein_coding Homo_sapiens 0 693
ENST00000374038 RBM39-020 protein_coding Homo_sapiens 0 351
ENST00000397254 RP6-218J18.2-001 processed_pseudogene Homo_sapiens 0 230
ENST00000403542 RBM39-006 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000412738 RBM39-017 nonsense_mediated_decay Homo_sapiens 0 335
ENST00000416108 RBM39-043 nonsense_mediated_decay Homo_sapiens 0.00001 55
ENST00000425184 RBM39-021 nonsense_mediated_decay Homo_sapiens 3e-25 119
ENST00000429968 RBM39-005 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000434927 RBM39-018 protein_coding Homo_sapiens 0 222
ENST00000444878 RBM39-007 nonsense_mediated_decay Homo_sapiens 0 693
ENST00000461283 RBM39-009 retained_intron Homo_sapiens 0 693
ENST00000463004 RBM39-004 retained_intron Homo_sapiens 0 693
ENST00000465158 RBM39-031 retained_intron Homo_sapiens 0 230
ENST00000476806 RBM39-029 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000481037 RBM39-022 retained_intron Homo_sapiens 0.000000000003 77
ENST00000482563 RBM39-011 retained_intron Homo_sapiens 0 222
ENST00000490354 RBM39-034 retained_intron Homo_sapiens 0 230
ENST00000492779 RBM39-010 retained_intron Homo_sapiens 0 693
ENST00000495293 RBM39-032 retained_intron Homo_sapiens 0 230
ENST00000496183 RBM39-033 retained_intron Homo_sapiens 0 230
ENST00000528062 RBM39-015 protein_coding Homo_sapiens 0 230

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