C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | RNA binding motif protein 39 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000476806  |
RBM39-029 |
ENSG00000131051 |
9606 | - |
20:35704326-35714251  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000WY | CIL_0000WY_0001 | CGP | 20:35699272-35742312 |
| CIL_0000X2 | CIL_0000X2_0001 | CGP | 20:35703609-35950381 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000142071
|
Rbm39-026 | nonsense_mediated_decay | Mus_musculus | 0 | 917 |
|
ENSMUST00000153514
|
Rbm39-025 | nonsense_mediated_decay | Mus_musculus | 0 | 894 |
|
ENSMUST00000155837
|
Rbm39-002 | nonsense_mediated_decay | Mus_musculus | 0 | 894 |
|
ENSMUST00000109587
|
Rbm39-001 | protein_coding | Mus_musculus | 0 | 894 |
|
ENSMUST00000029149
|
Rbm39-018 | protein_coding | Mus_musculus | 0 | 861 |
|
ENSMUST00000146297
|
Rbm39-003 | protein_coding | Mus_musculus | 0 | 861 |
|
ENSMUST00000119414
|
Gm15575-001 | processed_pseudogene | Mus_musculus | 0 | 453 |
|
ENSMUST00000148794
|
Rbm39-019 | protein_coding | Mus_musculus | 0 | 363 |
|
ENSMUST00000161037
|
Gm8837-001 | processed_pseudogene | Mus_musculus | 0 | 230 |
|
ENSMUST00000182280
|
Gm8816-001 | processed_pseudogene | Mus_musculus | 1e-30 | 137 |
