C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0001I3_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000179532-ENSG00000132275 | CGP | 9606 | 11:6497260-6603620  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000132275  (RRP8)ribosomal RNA processing 8, methyltransferase, homolog (yeast) |
ENST00000254605 (RRP8-001)
|
6595075-6603620 | protein_coding | |
|
ENST00000526352 (RRP8-004)
|
6599943-6601304 | retained_intron | ||
|
ENST00000530762 (RRP8-006)
|
6601254-6603597 | nonsense_mediated_decay | ||
|
ENST00000533907 (RRP8-002)
|
6599943-6603604 | nonsense_mediated_decay | ||
|
ENST00000534343 (RRP8-003)
|
6599920-6603579 | protein_coding | ||
|
ENSG00000179532 (DNHD1) dynein heavy chain domain 1 |
ENST00000254579 (DNHD1-201)
|
6497296-6572022 | protein_coding | |
|
ENST00000354685 (DNHD1-001)
|
6497301-6520860 | protein_coding | ||
|
ENST00000472080 (DNHD1-003)
|
6508213-6520858 | retained_intron | ||
|
ENST00000473019 (DNHD1-002)
|
6497260-6504200 | retained_intron | ||
|
ENST00000477562 (DNHD1-005)
|
6497305-6498689 | processed_transcript | ||
|
ENST00000496802 (DNHD1-004)
|
6497296-6498232 | protein_coding | ||
|
ENST00000524401 (DNHD1-020)
|
6558054-6564018 | nonsense_mediated_decay | ||
|
ENST00000525080 (DNHD1-024)
|
6566607-6567352 | protein_coding | ||
|
ENST00000525883 (DNHD1-013)
|
6564749-6572027 | retained_intron | ||
|
ENST00000526027 (DNHD1-019)
|
6558934-6564019 | retained_intron | ||
|
ENST00000527143 (DNHD1-022)
|
6568705-6571814 | protein_coding | ||
|
ENST00000527990 (DNHD1-007)
|
6498216-6572022 | protein_coding | ||
|
ENST00000529821 (DNHD1-012)
|
6564077-6572022 | retained_intron | ||
|
ENST00000530197 (DNHD1-014)
|
6566105-6572019 | retained_intron | ||
|
ENST00000531903 (DNHD1-018)
|
6558054-6563317 | retained_intron | ||
|
ENST00000532027 (DNHD1-008)
|
6533924-6549035 | nonsense_mediated_decay | ||
|
ENST00000532467 (DNHD1-016)
|
6567349-6572027 | retained_intron | ||
|
ENST00000533635 (DNHD1-015)
|
6564437-6572027 | retained_intron | ||
|
ENST00000533649 (DNHD1-011)
|
6546043-6549037 | retained_intron | ||
|
ENST00000534210 (DNHD1-009)
|
6528977-6593758 | retained_intron | ||
| CIL_0001I3_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000030882-ENSMUSG00000030888 | CGP | 10090 | 7:105640562-105737376 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000030888 (Rrp8) ribosomal RNA processing 8, methyltransferase, homolog (yeast) |
ENSMUST00000033179 (Rrp8-001)
|
105732207-105736781 | protein_coding | |
|
ENSMUST00000098148 (Rrp8-002)
|
105732404-105737376 | protein_coding | ||
|
ENSMUST00000127738 (Rrp8-004)
|
105733006-105734063 | processed_transcript | ||
|
ENSMUST00000137902 (Rrp8-003)
|
105734692-105736373 | processed_transcript | ||
|
ENSMUST00000148176 (Rrp8-006)
|
105732640-105733681 | retained_intron | ||
|
ENSMUST00000154852 (Rrp8-005)
|
105733006-105733946 | retained_intron | ||
|
ENSMUSG00000030890 (Ilk) integrin linked kinase |
ENSMUST00000033182 (Ilk-001)
|
105736592-105742925 | protein_coding | |
|
ENSMUST00000127298 (Ilk-008)
|
105740511-105741908 | protein_coding | ||
|
ENSMUST00000130565 (Ilk-012)
|
105741583-105742776 | retained_intron | ||
|
ENSMUST00000136687 (Ilk-004)
|
105736733-105741043 | protein_coding | ||
|
ENSMUST00000138150 (Ilk-010)
|
105741781-105742657 | processed_transcript | ||
|
ENSMUST00000145123 (Ilk-006)
|
105737101-105741361 | retained_intron | ||
|
ENSMUST00000148971 (Ilk-007)
|
105740188-105741764 | retained_intron | ||
|
ENSMUST00000149695 (Ilk-002)
|
105736671-105742918 | retained_intron | ||
|
ENSMUST00000151108 (Ilk-009)
|
105740972-105741910 | retained_intron | ||
|
ENSMUST00000152508 (Ilk-011)
|
105741182-105742096 | retained_intron | ||
|
ENSMUST00000153557 (Ilk-003)
|
105740511-105741174 | retained_intron | ||
|
ENSMUST00000154626 (Ilk-005)
|
105737123-105741475 | retained_intron | ||
|
ENSMUST00000163389 (Ilk-201)
|
105736725-105742925 | protein_coding | ||
|
ENSMUSG00000081911 (Mrps36-ps2) mitochondrial ribosomal protein S36, pseudogene 2 |
ENSMUST00000118658 (Mrps36-ps2-001)
|
105690259-105690567 | processed_pseudogene | |
|
ENSMUSG00000089847 (Timm10b) translocase of inner mitochondrial membrane 10B |
ENSMUST00000058333 (Timm10b-002)
|
105640448-105641843 | protein_coding | |
|
ENSMUST00000106780 (Timm10b-004)
|
105640571-105643632 | protein_coding | ||
|
ENSMUST00000106783 (Timm10b-001)
|
105640056-105643637 | protein_coding | ||
|
ENSMUST00000106784 (Timm10b-012)
|
105640590-105641825 | protein_coding | ||
|
ENSMUST00000106785 (Timm10b-007)
|
105640552-105651138 | protein_coding | ||
|
ENSMUST00000106786 (Timm10b-010)
|
105640570-105655748 | protein_coding | ||
|
ENSMUST00000140385 (Timm10b-013)
|
105640671-105641284 | retained_intron | ||
|
ENSMUST00000140577 (Timm10b-011)
|
105640589-105641749 | processed_transcript | ||
|
ENSMUST00000149819 (Timm10b-008)
|
105640564-105651679 | nonsense_mediated_decay | ||
|
ENSMUST00000150479 (Timm10b-003)
|
105640567-105641839 | nonsense_mediated_decay | ||
|
ENSMUST00000151193 (Timm10b-009)
|
105640564-105641785 | retained_intron | ||
Expression Patterns
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