C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8909
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000173625 Gm8909-004 ENSMUSG00000073402 10090 - 17:36165464-36167887 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLungOvaryTestisENSMUST00000173625
Transcript ID Adipose Brain Breast Colon Lung Ovary Testis
ENSMUST00000173625 0.163±0.06 0.058±0.00 0.192±0.08 2.822±1.33 0.328±0.12 0.278±0.11 0.050±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259951 HLA-F-003 protein_coding Homo_sapiens 0 457
ENST00000334668 HLA-F-202 protein_coding Homo_sapiens 0 457
ENST00000342322 HLA-F-001 protein_coding Homo_sapiens 0 451
ENST00000360323 HLA-G-001 protein_coding Homo_sapiens 0 446
ENST00000376630 HLA-E-001 protein_coding Homo_sapiens 0 414
ENST00000376802 HLA-A-003 protein_coding Homo_sapiens 0 529
ENST00000376806 HLA-A-002 protein_coding Homo_sapiens 0 534
ENST00000376809 HLA-A-201 protein_coding Homo_sapiens 0 534
ENST00000376818 HLA-G-004 protein_coding Homo_sapiens 0 296
ENST00000376828 HLA-G-002 protein_coding Homo_sapiens 0 446
ENST00000376844 HLA-F-003 protein_coding Homo_sapiens 0 451
ENST00000376861 HLA-F-001 protein_coding Homo_sapiens 0 457
ENST00000383516 HLA-F-003 protein_coding Homo_sapiens 0 451
ENST00000383597 HLA-E-001 protein_coding Homo_sapiens 0 409
ENST00000383620 HLA-H-001 unprocessed_pseudogene Homo_sapiens 0 503
ENST00000383621 HLA-G-001 protein_coding Homo_sapiens 0 440
ENST00000383623 HLA-G-004 protein_coding Homo_sapiens 0 296
ENST00000383626 HLA-F-001 protein_coding Homo_sapiens 0 451
ENST00000383627 HLA-F-003 protein_coding Homo_sapiens 0 451
ENST00000396634 HLA-A-001 protein_coding Homo_sapiens 0 534
ENST00000400665 HLA-G-002 protein_coding Homo_sapiens 0 440
ENST00000400682 HLA-G-002 protein_coding Homo_sapiens 0 440
ENST00000412263 HLA-G-004 protein_coding Homo_sapiens 0 296
ENST00000412585 HLA-B-001 protein_coding Homo_sapiens 0 486
ENST00000413609 HLA-A-003 protein_coding Homo_sapiens 0 479
ENST00000414592 HLA-A-003 protein_coding Homo_sapiens 0 518
ENST00000415289 HLA-E-001 protein_coding Homo_sapiens 0 409
ENST00000415649 HLA-E-001 protein_coding Homo_sapiens 0 409
ENST00000416096 HLA-A-003 protein_coding Homo_sapiens 0 507
ENST00000417978 HLA-A-002 protein_coding Homo_sapiens 0 512
ENST00000420024 HLA-F-006 protein_coding Homo_sapiens 0 414
ENST00000420110 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 468
ENST00000420559 HLA-G-002 protein_coding Homo_sapiens 0 446
ENST00000420923 HLA-F-006 protein_coding Homo_sapiens 0 414
ENST00000422371 HLA-G-002 protein_coding Homo_sapiens 0 446
ENST00000422439 HLA-F-001 protein_coding Homo_sapiens 0 451
ENST00000422711 HLA-F-001 protein_coding Homo_sapiens 0 451
ENST00000423011 HLA-G-001 protein_coding Homo_sapiens 0 440
ENST00000423373 HLA-G-001 protein_coding Homo_sapiens 0 446
ENST00000425603 HLA-E-001 protein_coding Homo_sapiens 0 414
ENST00000426675 HLA-F-006 protein_coding Homo_sapiens 0 414
ENST00000426863 HLA-G-004 protein_coding Homo_sapiens 0 296
ENST00000427936 HLA-E-001 protein_coding Homo_sapiens 0 409
ENST00000428296 HLA-F-003 protein_coding Homo_sapiens 0 451
ENST00000428701 HLA-G-201 protein_coding Homo_sapiens 0 446
ENST00000428952 HLA-G-001 protein_coding Homo_sapiens 0 446
ENST00000428988 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 396
ENST00000429294 HLA-F-006 protein_coding Homo_sapiens 0 420
ENST00000429724 HLA-H-001 unprocessed_pseudogene Homo_sapiens 0 490
ENST00000430151 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 390
ENST00000430253 HLA-G-005 protein_coding Homo_sapiens 0 296
ENST00000430472 HLA-F-003 protein_coding Homo_sapiens 0 451
ENST00000431463 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 425
ENST00000431930 HLA-A-001 protein_coding Homo_sapiens 0 512
ENST00000433515 HLA-F-006 protein_coding Homo_sapiens 0 414
ENST00000434333 HLA-B-003 protein_coding Homo_sapiens 0 287
ENST00000434881 HLA-G-002 protein_coding Homo_sapiens 0 440
ENST00000434907 HLA-G-004 protein_coding Homo_sapiens 0 296
ENST00000435058 HLA-F-001 protein_coding Homo_sapiens 0 451
ENST00000435780 HLA-K-001 unprocessed_pseudogene Homo_sapiens 0 377
ENST00000437287 HLA-H-001 unprocessed_pseudogene Homo_sapiens 0 473
ENST00000438861 HLA-A-002 protein_coding Homo_sapiens 0 486
ENST00000442199 HLA-H-001 unprocessed_pseudogene Homo_sapiens 0 473
ENST00000442939 HLA-A-003 protein_coding Homo_sapiens 0 507
ENST00000443552 HLA-A-001 protein_coding Homo_sapiens 0 512
ENST00000444098 HLA-G-001 protein_coding Homo_sapiens 0 440
ENST00000444289 HLA-A-002 protein_coding Homo_sapiens 0 512
ENST00000444683 HLA-E-001 protein_coding Homo_sapiens 0 414
ENST00000444891 HLA-F-001 protein_coding Homo_sapiens 0 451
ENST00000445657 HLA-F-003 protein_coding Homo_sapiens 0 451
ENST00000449127 HLA-G-001 protein_coding Homo_sapiens 0 446
ENST00000449501 HLA-H-001 unprocessed_pseudogene Homo_sapiens 0 479
ENST00000450024 HLA-H-001 unprocessed_pseudogene Homo_sapiens 0 484
ENST00000450342 HLA-A-003 protein_coding Homo_sapiens 0 523
ENST00000450984 HLA-G-002 protein_coding Homo_sapiens 0 446
ENST00000451304 HLA-H-001 unprocessed_pseudogene Homo_sapiens 0 492
ENST00000452577 HLA-G-004 protein_coding Homo_sapiens 0 296
ENST00000452715 HLA-G-004 protein_coding Homo_sapiens 0 296
ENST00000453057 HLA-A-001 protein_coding Homo_sapiens 0 486
ENST00000453975 HLA-A-003 protein_coding Homo_sapiens 0 479
ENST00000454091 HLA-A-001 protein_coding Homo_sapiens 0 525
ENST00000454646 HLA-F-006 protein_coding Homo_sapiens 0 414
ENST00000454779 HLA-F-006 protein_coding Homo_sapiens 0 414
ENST00000455882 HLA-A-002 protein_coding Homo_sapiens 0 486
ENST00000456012 HLA-A-001 protein_coding Homo_sapiens 0 531
ENST00000457879 HLA-A-001 protein_coding Homo_sapiens 0 486
ENST00000459768 HLA-G-003 retained_intron Homo_sapiens 0 444
ENST00000460029 HLA-J-002 processed_transcript Homo_sapiens 0 226
ENST00000460173 HLA-J-003 processed_transcript Homo_sapiens 0 246
ENST00000460301 HLA-L-002 processed_transcript Homo_sapiens 0 429
ENST00000460542 HLA-A-006 retained_intron Homo_sapiens 0 492
ENST00000461713 HLA-J-002 processed_transcript Homo_sapiens 0 239
ENST00000461903 HLA-A-007 retained_intron Homo_sapiens 0 540
ENST00000461939 HLA-F-011 processed_transcript Homo_sapiens 0 435
ENST00000462184 HLA-A-007 retained_intron Homo_sapiens 0 536
ENST00000462600 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000462607 HLA-F-011 processed_transcript Homo_sapiens 0 435
ENST00000462773 HLA-J-003 processed_transcript Homo_sapiens 0 233
ENST00000462986 HLA-A-007 retained_intron Homo_sapiens 0 531
ENST00000463148 HLA-A-004 retained_intron Homo_sapiens 0 516
ENST00000463348 HLA-L-002 processed_transcript Homo_sapiens 0 429
ENST00000463360 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000463574 HLA-B-005 retained_intron Homo_sapiens 0 296
ENST00000464610 HLA-A-004 retained_intron Homo_sapiens 0 507
ENST00000464713 HLA-A-005 retained_intron Homo_sapiens 0 531
ENST00000465114 HLA-F-014 processed_transcript Homo_sapiens 0 291
ENST00000465459 HLA-F-014 processed_transcript Homo_sapiens 0 296
ENST00000465498 HLA-A-007 retained_intron Homo_sapiens 0 518
ENST00000465778 HLA-F-012 processed_transcript Homo_sapiens 0 453
ENST00000466488 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000467373 HLA-J-004 processed_transcript Homo_sapiens 0 226
ENST00000467508 HLA-J-004 processed_transcript Homo_sapiens 0 226
ENST00000467814 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000468666 HLA-A-004 retained_intron Homo_sapiens 0 475
ENST00000468678 HLA-F-014 processed_transcript Homo_sapiens 0 291
ENST00000468687 HLA-J-002 processed_transcript Homo_sapiens 0 226
ENST00000468902 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000468995 HLA-A-006 retained_intron Homo_sapiens 0 518
ENST00000469281 HLA-J-002 processed_transcript Homo_sapiens 0 226
ENST00000469347 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000469472 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000469777 HLA-F-011 processed_transcript Homo_sapiens 0 435
ENST00000469837 HLA-J-004 processed_transcript Homo_sapiens 0 226
ENST00000470222 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 468
ENST00000470534 HLA-A-007 retained_intron Homo_sapiens 0 492
ENST00000470780 HLA-A-002 nonsense_mediated_decay Homo_sapiens 0 531
ENST00000470816 HLA-F-008 processed_transcript Homo_sapiens 0 230
ENST00000471291 HLA-A-005 retained_intron Homo_sapiens 0 492
ENST00000471304 HLA-F-008 processed_transcript Homo_sapiens 0 230
ENST00000471952 HLA-F-014 processed_transcript Homo_sapiens 0 291
ENST00000472371 HLA-F-014 processed_transcript Homo_sapiens 0 291
ENST00000473052 HLA-J-003 processed_transcript Homo_sapiens 0 233
ENST00000473059 HLA-A-005 retained_intron Homo_sapiens 0 536
ENST00000473396 HLA-J-002 processed_transcript Homo_sapiens 0 226
ENST00000473718 HLA-F-008 processed_transcript Homo_sapiens 0 230
ENST00000473825 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000473928 HLA-J-003 processed_transcript Homo_sapiens 0 233
ENST00000474460 HLA-J-004 processed_transcript Homo_sapiens 0 226
ENST00000474636 HLA-F-008 processed_transcript Homo_sapiens 0 230
ENST00000475416 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 453
ENST00000475567 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 468
ENST00000476132 HLA-A-007 retained_intron Homo_sapiens 0 492
ENST00000476710 HLA-F-012 processed_transcript Homo_sapiens 0 453
ENST00000476982 HLA-L-002 processed_transcript Homo_sapiens 0 429
ENST00000477650 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000478108 HLA-G-003 retained_intron Homo_sapiens 0 438
ENST00000478141 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000478186 HLA-A-004 retained_intron Homo_sapiens 0 475
ENST00000478258 HLA-A-006 retained_intron Homo_sapiens 0 531
ENST00000478355 HLA-G-003 retained_intron Homo_sapiens 0 444
ENST00000478519 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000479154 HLA-F-014 processed_transcript Homo_sapiens 0 291
ENST00000479320 HLA-A-006 retained_intron Homo_sapiens 0 540
ENST00000479494 HLA-A-006 retained_intron Homo_sapiens 0 492
ENST00000479675 HLA-A-006 retained_intron Homo_sapiens 0 518
ENST00000479969 HLA-A-007 retained_intron Homo_sapiens 0 518
ENST00000480742 HLA-F-012 processed_transcript Homo_sapiens 0 453
ENST00000480953 HLA-G-003 retained_intron Homo_sapiens 0 438
ENST00000481018 HLA-A-006 retained_intron Homo_sapiens 0 536
ENST00000481481 HLA-J-004 processed_transcript Homo_sapiens 0 226
ENST00000481951 HLA-J-003 processed_transcript Homo_sapiens 0 233
ENST00000482052 HLA-L-003 processed_transcript Homo_sapiens 0 429
ENST00000482187 HLA-L-002 processed_transcript Homo_sapiens 0 429
ENST00000482336 HLA-F-014 processed_transcript Homo_sapiens 0 291
ENST00000482589 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 468
ENST00000483860 HLA-F-012 processed_transcript Homo_sapiens 0 453
ENST00000484494 HLA-A-004 retained_intron Homo_sapiens 0 507
ENST00000484704 HLA-F-012 processed_transcript Homo_sapiens 0 459
ENST00000484755 HLA-G-003 retained_intron Homo_sapiens 0 444
ENST00000485166 HLA-A-005 retained_intron Homo_sapiens 0 518
ENST00000485463 HLA-F-008 processed_transcript Homo_sapiens 0 230
ENST00000485513 HLA-F-011 processed_transcript Homo_sapiens 0 440
ENST00000486252 HLA-J-002 processed_transcript Homo_sapiens 0 226
ENST00000486526 HLA-J-003 processed_transcript Homo_sapiens 0 233
ENST00000486553 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000487534 HLA-A-005 retained_intron Homo_sapiens 0 492
ENST00000488237 HLA-F-012 processed_transcript Homo_sapiens 0 453
ENST00000488715 HLA-J-004 processed_transcript Homo_sapiens 0 239
ENST00000488889 HLA-A-002 processed_transcript Homo_sapiens 0 525
ENST00000489502 HLA-F-008 processed_transcript Homo_sapiens 0 235
ENST00000489795 HLA-F-012 processed_transcript Homo_sapiens 0 453
ENST00000490304 HLA-F-011 processed_transcript Homo_sapiens 0 435
ENST00000490333 HLA-F-008 processed_transcript Homo_sapiens 0 230
ENST00000490454 HLA-A-005 retained_intron Homo_sapiens 0 518
ENST00000490720 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 390
ENST00000490987 HLA-J-003 processed_transcript Homo_sapiens 0 233
ENST00000491141 HLA-G-003 retained_intron Homo_sapiens 0 438
ENST00000491405 HLA-L-002 processed_transcript Homo_sapiens 0 420
ENST00000492006 HLA-J-002 processed_transcript Homo_sapiens 0 226
ENST00000492699 HLA-L-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 468
ENST00000492759 HLA-A-004 retained_intron Homo_sapiens 0 521
ENST00000494169 HLA-F-011 processed_transcript Homo_sapiens 0 435
ENST00000494247 HLA-G-003 retained_intron Homo_sapiens 0 444
ENST00000494367 HLA-J-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000494425 HLA-J-002 processed_transcript Homo_sapiens 0 226
ENST00000494784 HLA-J-003 processed_transcript Homo_sapiens 0 233
ENST00000494940 HLA-F-011 processed_transcript Homo_sapiens 0 435
ENST00000495086 HLA-J-004 processed_transcript Homo_sapiens 0 226
ENST00000495183 HLA-A-005 retained_intron Homo_sapiens 0 540
ENST00000495278 HLA-J-004 processed_transcript Homo_sapiens 0 226
ENST00000496081 HLA-A-004 retained_intron Homo_sapiens 0 529
ENST00000497494 HLA-L-002 processed_transcript Homo_sapiens 0 429
ENST00000498007 HLA-B-002 retained_intron Homo_sapiens 0 409
ENST00000499304 HLA-H-001 unprocessed_pseudogene Homo_sapiens 0 479
ENST00000546545 HLA-G-203 protein_coding Homo_sapiens 0 440
ENST00000546634 HLA-G-205 protein_coding Homo_sapiens 0 446
ENST00000547241 HLA-G-204 protein_coding Homo_sapiens 0 440
ENST00000547271 HLA-A-214 protein_coding Homo_sapiens 0 486
ENST00000547522 HLA-A-209 protein_coding Homo_sapiens 0 486
ENST00000547931 HLA-G-207 protein_coding Homo_sapiens 0 446
ENST00000549422 HLA-F-204 protein_coding Homo_sapiens 0 451
ENST00000549869 HLA-A-207 protein_coding Homo_sapiens 0 512
ENST00000550728 HLA-A-213 protein_coding Homo_sapiens 0 531
ENST00000550897 HLA-G-206 protein_coding Homo_sapiens 0 446
ENST00000550932 HLA-F-203 protein_coding Homo_sapiens 0 451
ENST00000551120 HLA-A-211 protein_coding Homo_sapiens 0 512
ENST00000551780 HLA-F-209 protein_coding Homo_sapiens 0 451
ENST00000551832 HLA-F-208 protein_coding Homo_sapiens 0 451
ENST00000552082 HLA-F-201 protein_coding Homo_sapiens 0 451
ENST00000552193 HLA-A-212 protein_coding Homo_sapiens 0 512
ENST00000552493 HLA-A-205 protein_coding Homo_sapiens 0 525
ENST00000552498 HLA-A-208 protein_coding Homo_sapiens 0 512
ENST00000553052 HLA-G-202 protein_coding Homo_sapiens 0 440
ENST00000606273 HLA-F-015 processed_transcript Homo_sapiens 0 335
ENST00000611149 HLA-A-210 protein_coding Homo_sapiens 0 486
ENST00000612360 HLA-G-004 protein_coding Homo_sapiens 0 291
ENST00000612468 HLA-E-201 protein_coding Homo_sapiens 0 414
ENST00000612643 HLA-E-207 protein_coding Homo_sapiens 0 414
ENST00000612644 HLA-A-206 protein_coding Homo_sapiens 0 520
ENST00000615098 HLA-G-001 protein_coding Homo_sapiens 0 435
ENST00000615464 HLA-G-002 protein_coding Homo_sapiens 0 435
ENST00000615789 HLA-G-003 retained_intron Homo_sapiens 0 433
ENST00000616124 HLA-E-202 protein_coding Homo_sapiens 0 409
ENST00000617604 HLA-F-206 protein_coding Homo_sapiens 0 451
ENST00000617749 HLA-E-205 protein_coding Homo_sapiens 0 409
ENST00000618039 HLA-G-005 nonsense_mediated_decay Homo_sapiens 0 291
ENST00000618812 HLA-G-208 protein_coding Homo_sapiens 0 435
ENST00000618827 HLA-E-206 protein_coding Homo_sapiens 0 409
ENST00000620168 HLA-A-202 protein_coding Homo_sapiens 0 534
ENST00000620537 HLA-E-203 protein_coding Homo_sapiens 0 414
ENST00000621113 HLA-E-204 protein_coding Homo_sapiens 0 409
ENST00000622145 HLA-F-207 protein_coding Homo_sapiens 0 451

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