| Transcript ID | Brain | Muscle | Ovary | Placenta |
|---|---|---|---|---|
| ENSMUST00000174391 | 5.231±0.45 | 3.146±1.61 | 5.520±2.48 | 2.836±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | synaptotagmin binding, cytoplasmic RNA interacting protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000174391  |
Syncrip-004 |
ENSMUSG00000032423 |
10090 | - |
9:88449731-88482248  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007K0 | CIL_0007K0_0002 | UCNEbase | 9:87376892-88455782 |
| CIL_0007TL | CIL_0007TL_0002 | VISTA | 9:87895357-88499255 |
| CIL_0005XI | CIL_0005XI_0002 | CGP | 9:88376750-88456616 |
| CIL_0005XJ | CIL_0005XJ_0002 | CGP | 9:88407432-88482574 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0008143 | IDA | poly(A) binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000355238
|
SYNCRIP-002 | protein_coding | Homo_sapiens | 0 | 7090 |
|
ENST00000369622
|
SYNCRIP-001 | protein_coding | Homo_sapiens | 0 | 2451 |
|
ENST00000434910
|
RP4-775C13.1-001 | processed_pseudogene | Homo_sapiens | 0 | 2357 |
|
ENST00000444272
|
SYNCRIP-003 | protein_coding | Homo_sapiens | 0 | 673 |
|
ENST00000503906
|
RP11-321N4.5-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 604 |
|
ENST00000616122
|
SYNCRIP-201 | protein_coding | Homo_sapiens | 0 | 7252 |
