C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000503906  |
RP11-321N4.5-001 |
ENSG00000271793 |
9606 | - |
6:85557978-85615234  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007K0 | CIL_0007K0_0001 | UCNEbase | 6:84361462-85614404 |
| CIL_0007TL | CIL_0007TL_0001 | VISTA | 6:84971170-85574346 |
| CIL_0006BN | CIL_0006BN_0002 | CGP | 6:85449584-85594156 |
| CIL_0005XI | CIL_0005XI_0001 | CGP | 6:85505496-85615234 |
| CIL_0005XJ | CIL_0005XJ_0001 | CGP | 6:85557978-85643792 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000173131
|
Gm20537-001 | nonsense_mediated_decay | Mus_musculus | 0 | 1299 |
|
ENSMUST00000174806
|
Snx14-006 | protein_coding | Mus_musculus | 0 | 689 |
|
ENSMUST00000173011
|
Snx14-007 | protein_coding | Mus_musculus | 0 | 689 |
|
ENSMUST00000165315
|
Snx14-001 | protein_coding | Mus_musculus | 0 | 689 |
|
ENSMUST00000154586
|
Gm20537-002 | nonsense_mediated_decay | Mus_musculus | 0 | 678 |
|
ENSMUST00000174282
|
Syncrip-003 | protein_coding | Mus_musculus | 0 | 617 |
|
ENSMUST00000172828
|
Syncrip-005 | nonsense_mediated_decay | Mus_musculus | 0 | 604 |
|
ENSMUST00000174269
|
Syncrip-006 | protein_coding | Mus_musculus | 0 | 604 |
|
ENSMUST00000174688
|
Syncrip-007 | protein_coding | Mus_musculus | 0 | 604 |
|
ENSMUST00000069221
|
Syncrip-001 | protein_coding | Mus_musculus | 0 | 604 |
|
ENSMUST00000174391
|
Syncrip-004 | protein_coding | Mus_musculus | 0 | 604 |
|
ENSMUST00000126405
|
Snx14-003 | nonsense_mediated_decay | Mus_musculus | 0 | 553 |
|
ENSMUST00000174361
|
Syncrip-008 | protein_coding | Mus_musculus | 0 | 455 |
|
ENSMUST00000173801
|
Syncrip-002 | protein_coding | Mus_musculus | 0 | 455 |
|
ENSMUST00000126563
|
Snx14-004 | retained_intron | Mus_musculus | 0 | 390 |
|
ENSMUST00000173039
|
Snx14-005 | protein_coding | Mus_musculus | 0 | 390 |
