C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2383
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181461 Gm2383-001 ENSMUSG00000097628 10090 + 1:12565577-12566383 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000181461
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000181461 0.119±0.06 0.113±0.04 0.051±0.01 0.036±0.02 0.446±0.30 0.181±0.06 0.103±0.05 0.073±0.04 0.051±0.01 0.068±0.02 0.198±0.12 0.094±0.05 1.513±1.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001SG CIL_0001SG_0003 CGP 1:11414105-12861192
CIL_00087Y CIL_00087Y_0002 VISTA 1:12314812-12917322

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 246
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 590
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 590
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 590
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 590
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 590
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 475
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 488
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 516
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 466
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 222
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 244
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 451
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 233
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 529
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 252
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 233
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 390
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 263
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 327
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-30 134
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 309
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 553
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 473
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 590
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 590
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 590
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 335
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 327
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 255
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 416
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 459
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 191
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 1.96182e-44 183
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 521
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 472
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 283
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 590

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