C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477321 RP11-289K10.1-001 ENSG00000240052 9606 + 5:53413504-53414260 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLungENST00000477321
Transcript ID Adrenal Lung
ENST00000477321 0.048±0.00 1.608±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G2 CIL_0007G2_0002 CGP 5:53095679-53487134

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181233 Rps19-ps6-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000168472 Rps19-ps1-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000100614 Rps19-ps2-001 processed_pseudogene Mus_musculus 0 497
ENSMUST00000091925 Rps19-ps4-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000108429 Rps19-006 protein_coding Mus_musculus 0 484
ENSMUST00000108430 Rps19-001 protein_coding Mus_musculus 0 484
ENSMUST00000116122 Rps19-ps7-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000161787 Rps19-ps9-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000159750 Rps19-ps10-001 processed_pseudogene Mus_musculus 0 440
ENSMUST00000124035 Rps19-008 protein_coding Mus_musculus 0 440
ENSMUST00000108428 Rps19-003 protein_coding Mus_musculus 0 440
ENSMUST00000116174 Rps19-ps3-001 processed_pseudogene Mus_musculus 0 436
ENSMUST00000153451 Rps19-005 protein_coding Mus_musculus 0 433
ENSMUST00000156372 Rps19-007 protein_coding Mus_musculus 0 412
ENSMUST00000181937 Rps19-ps12-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000160308 Rps19-ps11-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000180745 Rps19-ps5-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000180714 Rps19-ps8-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000119451 Gm14861-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000130335 Rps19-010 processed_transcript Mus_musculus 0 303
ENSMUST00000129847 Rps19-004 nonsense_mediated_decay Mus_musculus 0 303
ENSMUST00000119674 Gm15504-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000119807 Gm15745-001 processed_pseudogene Mus_musculus 2e-36 156
ENSMUST00000121832 Rps19-ps14-001 processed_pseudogene Mus_musculus 2e-26 122
ENSMUST00000146004 Rps19-009 processed_transcript Mus_musculus 1e-18 97

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