C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4891
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182279 Gm4891-001 ENSMUSG00000098223 10090 + 8:80933677-80934588 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverMuscleOvaryPlacentaENSMUST00000182279
Transcript ID Adipose Breast Heart Kidney Liver Muscle Ovary Placenta
ENSMUST00000182279 0.230±0.10 0.082±0.03 0.032±0.00 0.034±0.00 0.020±0.00 0.095±0.04 0.115±0.06 0.066±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 335
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 881
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 664
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 867
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 881
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 881
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 662
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 625
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 702
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 614
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 272
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 558
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 625
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 804
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 649
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 503
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 475
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 665
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 665
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 592
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 374
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 355
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 664
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 664
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 741
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 617
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 623
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 725
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 490
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 267
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 671
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 708
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 667
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 579
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 579
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 785

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