C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6944
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182449 Gm6944-001 ENSMUSG00000098141 10090 + 18:55972286-55973291 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000182449
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000182449 0.035±0.00 0.022±0.01 0.060±0.05 0.248±0.27 0.111±0.00 0.122±0.00 0.065±0.01 0.037±0.01 0.041±0.00 0.167±0.06 0.078±0.10 0.033±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00041N CIL_00041N_0002 CGP 18:54888045-56503792

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 333
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1048
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 828
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1037
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1048
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1048
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 771
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 891
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 780
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 963
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 830
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 652
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 496
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 649
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 708
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 566
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 577
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-30 134
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 444
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 739
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 1005
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 499
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 828
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 828
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 531
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 752
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 784
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 261
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 817
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 556
ENST00000515281 GAPDHP70-001 processed_pseudogene Homo_sapiens 0 737
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 706
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 641
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 641
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 477
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 968

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