C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6771
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182716 Gm6771-001 ENSMUSG00000098030 10090 + 17:41345997-41346997 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverOvaryTestisENSMUST00000182716
Transcript ID Adipose Breast Heart Kidney Liver Ovary Testis
ENSMUST00000182716 0.032±0.00 0.078±0.00 0.031±0.00 0.033±0.00 0.045±0.00 0.119±0.07 0.090±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 917
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 717
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 915
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 917
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 917
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 726
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 680
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 760
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 673
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 243
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 483
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 689
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 617
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 839
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 712
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 571
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 422
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 545
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 616
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 520
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 503
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 401
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 630
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 874
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 451
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 717
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 717
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 444
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 645
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 684
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 758
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 499
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 230
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 228
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 697
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 704
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 481
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 628
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 817

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