C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8529
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183298 Gm8529-001 ENSMUSG00000098058 10090 - 18:50220071-50220815 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverOvaryPlacentaTestisENSMUST00000183298
Transcript ID Brain Kidney Liver Ovary Placenta Testis
ENSMUST00000183298 0.039±0.01 0.071±0.03 0.033±0.02 0.164±0.01 0.046±0.04 0.085±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B4 CIL_0004B4_0002 CGP 18:50128201-50283019

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 276
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 737
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 737
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 737
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 737
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 737
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 584
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 556
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 649
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 505
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 486
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 660
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 593
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 460
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 566
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 603
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 342
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 473
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 507
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 340
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 399
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 713
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 508
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 737
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 737
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 350
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 440
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 532
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 244
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 612
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 420
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 318
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 737

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