C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein 4B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000183332 Rbm4b-007 ENSMUSG00000033760 10090 + 19:4761396-4767065 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000183332
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000183332 1.907±1.08 1.501±0.27 3.175±0.00 4.810±2.98 2.355±0.57 1.673±0.34 0.619±0.06 1.101±0.12 1.780±0.84 1.660±0.55 0.451±0.00 1.780±1.09 1.410±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003YM CIL_0003YM_0006 CGP 19:4742913-4811612
CIL_0003YM CIL_0003YM_0005 CGP 19:4756543-4793901

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000271915 KCNN3-001 protein_coding Homo_sapiens 0.0002 55
ENST00000310046 RBM4B-001 protein_coding Homo_sapiens 0 815
ENST00000310092 RBM4-001 protein_coding Homo_sapiens 0 420
ENST00000336418 AP3S2-001 protein_coding Homo_sapiens 0.0001 55
ENST00000344248 OR7D2-001 protein_coding Homo_sapiens 0.000005 58
ENST00000391860 PGBD5-001 protein_coding Homo_sapiens 0.00005 57
ENST00000396053 RBM4-008 protein_coding Homo_sapiens 0 630
ENST00000408993 RBM4-002 protein_coding Homo_sapiens 0 420
ENST00000409406 RBM4-003 protein_coding Homo_sapiens 0 420
ENST00000412278 RBM14-RBM4-004 protein_coding Homo_sapiens 0 416
ENST00000421355 RBM14-RBM4-003 nonsense_mediated_decay Homo_sapiens 0 427
ENST00000431837 IRAK4-201 protein_coding Homo_sapiens 0.00008 55
ENST00000448290 IRAK4-001 protein_coding Homo_sapiens 0.00005 55
ENST00000498401 RP11-270M14.1-001 transcribed_processed_pseudogene Homo_sapiens 0.000005 57
ENST00000515838 RBM4-015 processed_transcript Homo_sapiens 0 191
ENST00000525754 RBM4B-002 protein_coding Homo_sapiens 0 815
ENST00000528106 RBM4B-005 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000529195 RBM4B-006 processed_transcript Homo_sapiens 0 523
ENST00000531969 RBM4B-004 protein_coding Homo_sapiens 0 370
ENST00000534198 RBM4B-007 processed_transcript Homo_sapiens 0 377
ENST00000613694 IRAK4-202 protein_coding Homo_sapiens 0.00008 55
ENST00000618040 KCNN3-201 protein_coding Homo_sapiens 0.0002 55

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