| Transcript ID | Colon | Placenta | Testis |
|---|---|---|---|
| ENST00000340954 | 1.576±0.00 | 4.589±0.00 | 4.363±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | staufen double-stranded RNA binding protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000340954  |
STAU1-004 |
ENSG00000124214 |
9606 | - |
20:49113523-49188367  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0001XR | CIL_0001XR_0001 | CGP | 20:49046246-49188367 |
| CIL_0001T2 | CIL_0001T2_0001 | CGP | 20:49113339-49244077 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005737 | IDA | cytoplasm |
| GO:0005791 | TAS | rough endoplasmic reticulum |
| GO:0005875 | TAS | microtubule associated complex |
| GO:0010494 | ISS | cytoplasmic stress granule |
| GO:0016020 | IDA | membrane |
| GO:0030425 | IDA | dendrite |
| GO:0036464 | IDA | cytoplasmic ribonucleoprotein granule |
| GO:0044297 | IDA | cell body |
| GO:0044822 | IDA | poly(A) RNA binding |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000109235
|
Stau1-001 | protein_coding | Mus_musculus | 0 | 1871 |
|
ENSMUST00000109236
|
Stau1-002 | protein_coding | Mus_musculus | 0 | 1849 |
|
ENSMUST00000109238
|
Stau1-003 | protein_coding | Mus_musculus | 0 | 1794 |
|
ENSMUST00000049412
|
Stau1-005 | protein_coding | Mus_musculus | 0 | 1692 |
|
ENSMUST00000184390
|
Stau1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 1099 |
|
ENSMUST00000142481
|
Stau1-006 | retained_intron | Mus_musculus | 0 | 989 |
|
ENSMUST00000149454
|
Stau1-008 | retained_intron | Mus_musculus | 0 | 883 |
|
ENSMUST00000154506
|
Stau1-010 | retained_intron | Mus_musculus | 0 | 632 |
|
ENSMUST00000130790
|
Stau1-011 | retained_intron | Mus_musculus | 0 | 414 |
|
ENSMUST00000134664
|
Stau1-009 | retained_intron | Mus_musculus | 0 | 285 |
