C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: staufen double-stranded RNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371792 STAU1-007 ENSG00000124214 9606 - 20:49113523-49188367 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungMuscleOvaryENST00000371792
Transcript ID Lung Muscle Ovary
ENST00000371792 5.604±0.00 0.832±0.00 3.224±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001XR CIL_0001XR_0001 CGP 20:49046246-49188367
CIL_0001T2 CIL_0001T2_0001 CGP 20:49113339-49244077

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109236 Stau1-002 protein_coding Mus_musculus 0 2019
ENSMUST00000109235 Stau1-001 protein_coding Mus_musculus 0 2002
ENSMUST00000109238 Stau1-003 protein_coding Mus_musculus 0 1910
ENSMUST00000049412 Stau1-005 protein_coding Mus_musculus 0 1731
ENSMUST00000184390 Stau1-004 nonsense_mediated_decay Mus_musculus 0 1077
ENSMUST00000142481 Stau1-006 retained_intron Mus_musculus 0 989
ENSMUST00000149454 Stau1-008 retained_intron Mus_musculus 0 883
ENSMUST00000154506 Stau1-010 retained_intron Mus_musculus 0 610
ENSMUST00000130790 Stau1-011 retained_intron Mus_musculus 0 392
ENSMUST00000134664 Stau1-009 retained_intron Mus_musculus 0 285

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