C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000392009 RPL5P5-001 ENSG00000213051 9606 - 1:185226808-185227700 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000392009
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000392009 0.025±0.00 0.051±0.00 0.013±0.00 0.096±0.03 0.035±0.00 0.012±0.00 0.038±0.00 0.096±0.00 0.035±0.00 0.035±0.00 0.148±0.00 0.052±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 1016
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 1016
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 1016
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 972
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 972
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 701
ENSMUST00000169624 Gm19840-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 577
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 446
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000121897 Gm15877-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 250
ENSMUST00000151767 Rpl5-006 retained_intron Mus_musculus 0 235

Loading