C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000KE_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052331-ENSDARG00000059961 CGP 7955 7:44134315-44162641
GeneTranscriptPositionBiotype
ENSDARG00000052331 (BX322787.1)
ATP-binding cassette, sub-family F, member 2-like (LOC100000576), mRNA 		ENSDART00000074155 (BX322787.1-201) 44134315-44148806 protein_coding
ENSDARG00000059961 (chpf2)
chondroitin polymerizing factor 2 		ENSDART00000083967 (chpf2-201) 44151953-44162641 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0000KE_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000033050-ENSG00000033100 CGP 9606 7:151207837-151238827
GeneTranscriptPositionBiotype
ENSG00000033050 (ABCF2)
ATP-binding cassette, sub-family F (GCN20), member 2 		ENST00000222388 (ABCF2-003) 151207837-151227166 protein_coding
ENST00000287844 (ABCF2-001) 151212490-151227230 protein_coding
ENST00000441774 (ABCF2-004) 151223680-151227035 protein_coding
ENST00000468073 (ABCF2-006) 151221636-151226626 protein_coding
ENST00000473874 (ABCF2-007) 151218160-151221984 processed_transcript
ENST00000477252 (ABCF2-005) 151226473-151226958 processed_transcript
ENSG00000033100 (CHPF2)
chondroitin polymerizing factor 2 		ENST00000035307 (CHPF2-001) 151232499-151238827 protein_coding
ENST00000465601 (CHPF2-004) 151235451-151237593 nonsense_mediated_decay
ENST00000482173 (CHPF2-003) 151232489-151235269 protein_coding
ENST00000495645 (CHPF2-002) 151232489-151238819 protein_coding
ENSG00000082014 (SMARCD3)
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 		ENST00000262188 (SMARCD3-002) 151238973-151248973 protein_coding
ENST00000356800 (SMARCD3-201) 151238976-151276734 protein_coding
ENST00000392811 (SMARCD3-001) 151238973-151277452 protein_coding
ENST00000460431 (SMARCD3-010) 151242481-151246149 processed_transcript
ENST00000469154 (SMARCD3-004) 151238974-151275252 nonsense_mediated_decay
ENST00000470588 (SMARCD3-007) 151239008-151241492 retained_intron
ENST00000472103 (SMARCD3-012) 151241799-151243686 retained_intron
ENST00000472789 (SMARCD3-014) 151238981-151240208 retained_intron
ENST00000472988 (SMARCD3-005) 151240900-151248685 retained_intron
ENST00000477169 (SMARCD3-009) 151241958-151254478 processed_transcript
ENST00000485592 (SMARCD3-011) 151240422-151245513 nonsense_mediated_decay
ENST00000485610 (SMARCD3-006) 151241258-151248646 retained_intron
ENST00000489503 (SMARCD3-013) 151241908-151242792 processed_transcript
ENST00000491651 (SMARCD3-008) 151242721-151277896 protein_coding
ENST00000496530 (SMARCD3-015) 151238764-151239470 processed_transcript

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KE_0001ENSDARG00000052331ENSDART00000074155ENSDARG00000059961ENSDART00000083967CIL_0000KE_0002ENSG00000033050ENST00000222388ENST00000287844ENST00000441774ENST00000468073ENST00000473874ENST00000477252ENSG00000033100ENST00000035307ENST00000465601ENST00000482173ENST00000495645ENSG00000082014ENST00000262188ENST00000356800ENST00000392811ENST00000460431ENST00000469154ENST00000470588ENST00000472103ENST00000472789ENST00000472988ENST00000477169ENST00000485592ENST00000485610ENST00000489503ENST00000491651ENST00000496530
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000KE_0001ENSDARG00000052331ENSDART00000074155ENSDARG00000059961ENSDART00000083967CIL_0000KE_0002ENSG00000033050ENST00000222388ENST00000287844ENST00000468073ENST00000473874ENSG00000033100ENST00000035307ENST00000495645ENSG00000082014ENST00000262188ENST00000356800ENST00000470588ENST00000485610ENST00000489503
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052331 ENSDART00000074155 N/A N/A N/A 2.055±0.39 N/A N/A 6.501±0.40 0.800±0.33 1.473±0.00 N/A 14.121±0.00 N/A N/A N/A
ENSDARG00000059961 ENSDART00000083967 N/A N/A N/A 2.243±0.44 N/A N/A 2.252±0.63 0.969±0.00 1.733±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000033050 ENST00000222388 N/A 6.427±0.00 0.576±0.00 2.509±0.00 4.020±0.00 2.810±0.00 1.906±0.31 1.221±0.00 2.822±0.00 2.143±0.39 13.638±5.83 4.933±0.57 6.683±3.80 9.006±4.90
ENST00000287844 6.422±0.00 5.555±0.00 0.821±0.00 8.380±3.68 3.415±2.63 3.201±2.07 5.174±3.38 6.435±6.08 1.921±0.29 3.932±0.00 10.893±9.89 7.618±3.48 8.194±2.26 8.639±1.77
ENST00000441774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468073 N/A N/A 1.658±0.00 N/A N/A N/A N/A N/A N/A 2.096±0.00 N/A N/A N/A N/A
ENST00000473874 N/A N/A N/A N/A N/A N/A N/A 1.319±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000033100 ENST00000035307 6.705±0.00 7.997±0.00 N/A 5.556±2.28 3.130±2.04 N/A 3.051±1.92 3.497±1.93 2.121±0.68 3.027±1.68 N/A 13.141±8.83 21.349±3.17 7.953±2.82
ENST00000465601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482173 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495645 4.896±0.00 8.835±0.00 N/A N/A 4.012±0.00 4.871±0.00 N/A 7.583±0.00 4.052±0.00 7.058±0.00 N/A 5.203±0.00 7.290±1.32 N/A
ENSG00000082014 ENST00000262188 N/A N/A N/A N/A 5.095±0.00 6.717±0.00 5.350±4.50 N/A 1.493±0.00 N/A 14.349±10.51 N/A N/A N/A
ENST00000356800 10.599±0.00 14.774±0.00 N/A 30.181±18.39 13.131±0.00 15.568±0.00 5.912±3.29 14.402±0.00 N/A 15.702±0.00 9.038±3.56 42.663±33.85 8.138±0.00 32.402±20.67
ENST00000392811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469154 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.594±0.00 N/A N/A N/A
ENST00000472103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485610 N/A N/A N/A N/A N/A N/A N/A 0.840±0.00 N/A N/A N/A N/A N/A N/A
ENST00000489503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 29.884±0.00
ENST00000491651 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496530 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading