Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	heterogeneous nuclear ribonucleoprotein A1 pseudogene 41
ENST00000397777	HNRNPA1P41-001	ENSG00000220937	9606	-	9:4944670-4945902	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000397777	0.058±0.00	0.106±0.00	0.093±0.00	0.015±0.00	0.097±0.00	0.014±0.00	0.030±0.00	0.080±0.00	0.015±0.00	0.158±0.12	0.015±0.00	0.021±0.00	0.107±0.04

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0000NF	CIL_0000NF_0001	CGP	9:4792834-5128183

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000168019	Gm10052-001	processed_pseudogene	Mus_musculus	0	604
ENSMUST00000087351	Hnrnpa1-202	protein_coding	Mus_musculus	0	604
ENSMUST00000036004	Hnrnpa1-201	protein_coding	Mus_musculus	0	604
ENSMUST00000050143	Gm7729-001	unprocessed_pseudogene	Mus_musculus	0	599
ENSMUST00000117081	Gm5643-001	processed_pseudogene	Mus_musculus	0	586
ENSMUST00000118970	Gm16216-001	processed_pseudogene	Mus_musculus	0	582
ENSMUST00000181363	Gm8652-001	processed_pseudogene	Mus_musculus	0	571
ENSMUST00000022493	Gm5803-001	processed_pseudogene	Mus_musculus	0	549
ENSMUST00000040649	AC165425.1-201	pseudogene	Mus_musculus	0	481
ENSMUST00000119387	Gm12458-001	processed_pseudogene	Mus_musculus	0	418
ENSMUST00000189260	RP23-389M9.4-001	processed_pseudogene	Mus_musculus	0	374
ENSMUST00000120205	Gm13297-001	processed_pseudogene	Mus_musculus	0	307
ENSMUST00000178732	RP24-383H12.1-001	processed_pseudogene	Mus_musculus	0	228
ENSMUST00000122005	Gm12382-001	processed_pseudogene	Mus_musculus	0	211

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