C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: histone cluster 1, H2a, pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000406683 HIST1H2APS1-001 ENSG00000216436 9606 + 6:25732497-25732827 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyTestisENST00000406683
Transcript ID Breast Kidney Testis
ENST00000406683 0.117±0.00 0.116±0.00 15.535±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091710 Hist1h2aj-001 unprocessed_pseudogene Mus_musculus 0 243
ENSMUST00000090776 Hist1h2ad-001 protein_coding Mus_musculus 0 243
ENSMUST00000070124 Hist1h2ai-001 protein_coding Mus_musculus 0 243
ENSMUST00000091742 Hist1h2ah-001 protein_coding Mus_musculus 0 243
ENSMUST00000091741 Hist1h2ag-001 protein_coding Mus_musculus 0 237
ENSMUST00000081342 Hist1h2ap-001 protein_coding Mus_musculus 0 237
ENSMUST00000073261 Hist1h2af-001 protein_coding Mus_musculus 0 237
ENSMUST00000091745 Hist1h2ao-001 protein_coding Mus_musculus 0 237
ENSMUST00000078369 Hist1h2ab-001 protein_coding Mus_musculus 0 237
ENSMUST00000091751 Hist1h2an-001 protein_coding Mus_musculus 0 231
ENSMUST00000102969 Hist1h2ae-001 protein_coding Mus_musculus 0 231
ENSMUST00000171127 Hist1h2ac-001 protein_coding Mus_musculus 0 231
ENSMUST00000078756 Hist2h2aa2-001 protein_coding Mus_musculus 0 220
ENSMUST00000074976 Hist2h2aa1-001 protein_coding Mus_musculus 0 220
ENSMUST00000074752 Hist1h2ak-001 protein_coding Mus_musculus 0 220
ENSMUST00000091708 Hist1h2al-201 protein_coding Mus_musculus 0 220
ENSMUST00000052686 H2afx-001 protein_coding Mus_musculus 0 204
ENSMUST00000118168 Gm11336-001 unprocessed_pseudogene Mus_musculus 0 195
ENSMUST00000072391 Hist1h2aa-001 protein_coding Mus_musculus 3e-38 161

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