C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2al
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000091708 Hist1h2al-201 ENSMUSG00000091383 10090 - 13:51202688-51203065 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000091708
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000091708 1.024±0.70 0.504±0.31 1.580±1.40 4.614±3.69 0.299±0.18 0.258±0.09 0.218±0.09 0.454±0.22 0.443±0.47 0.284±0.14 0.420±0.22 3.505±3.94 15.565±26.98

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000102972 protein_coding Danio_rerio 0 303
ENSDART00000155501 protein_coding Danio_rerio 0 303
ENSDART00000103006 protein_coding Danio_rerio 0 302
ENSDART00000129969 si:ch211-113a14.19-001 protein_coding Danio_rerio 0 291
ENSDART00000110632 protein_coding Danio_rerio 0 287
ENSDART00000103013 si:ch211-113a14.19-001 protein_coding Danio_rerio 0 285
ENSDART00000099859 protein_coding Danio_rerio 0 276
ENSDART00000073402 protein_coding Danio_rerio 0 274
ENSDART00000108936 protein_coding Danio_rerio 0 272
ENSDART00000155060 protein_coding Danio_rerio 0 272
ENSDART00000126259 protein_coding Danio_rerio 0 270
ENSDART00000114908 protein_coding Danio_rerio 0 270
ENSDART00000129239 protein_coding Danio_rerio 0 259
ENSDART00000147978 protein_coding Danio_rerio 0 254
ENSDART00000073454 protein_coding Danio_rerio 0 252
ENSDART00000115109 protein_coding Danio_rerio 0 252
ENSDART00000129403 protein_coding Danio_rerio 0 243
ENST00000314088 HIST1H2AC-001 nonsense_mediated_decay Homo_sapiens 0 433
ENST00000331380 HIST2H2AC-001 protein_coding Homo_sapiens 0 433
ENST00000333151 HIST1H2AJ-001 protein_coding Homo_sapiens 0 449
ENST00000341023 HIST1H2AD-001 protein_coding Homo_sapiens 0 418
ENST00000358739 HIST1H2AI-001 protein_coding Homo_sapiens 0 479
ENST00000359193 HIST1H2AG-001 protein_coding Homo_sapiens 0 462
ENST00000359611 HIST1H2AM-001 protein_coding Homo_sapiens 0 440
ENST00000366695 HIST3H2A-001 protein_coding Homo_sapiens 0 483
ENST00000369159 HIST2H2AA4-001 protein_coding Homo_sapiens 0 472
ENST00000375167 H2AFX-002 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000377459 HIST1H2AH-001 protein_coding Homo_sapiens 0 431
ENST00000377791 HIST1H2AC-201 protein_coding Homo_sapiens 0 433
ENST00000389078 H2AFJ-005 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000406683 HIST1H2APS1-001 processed_pseudogene Homo_sapiens 0 220
ENST00000479986 HIST1H3J-002 processed_transcript Homo_sapiens 0 409
ENST00000501744 H2AFJ-002 nonsense_mediated_decay Homo_sapiens 0 348
ENST00000530167 H2AFX-001 protein_coding Homo_sapiens 0 462
ENST00000544848 H2AFJ-001 protein_coding Homo_sapiens 0 409
ENST00000602637 HIST1H2AC-002 protein_coding Homo_sapiens 0 433
ENST00000607355 HIST2H2AA4-001 protein_coding Homo_sapiens 0 472
ENST00000612898 HIST1H2BN-001 protein_coding Homo_sapiens 0 457
ENST00000613174 HIST1H2AL-001 protein_coding Homo_sapiens 0 464
ENST00000618958 HIST1H2AK-001 protein_coding Homo_sapiens 0 457

Loading