C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11336
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118168 Gm11336-001 ENSMUSG00000080999 10090 - 13:23746166-23746499 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000118168
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000118168 0.652±0.27 0.299±0.09 0.137±0.08 0.805±0.46 1.037±0.79 0.597±0.27 0.243±0.06 1.129±1.17 0.341±0.11 0.999±0.48 0.344±0.08 0.231±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000099859 protein_coding Danio_rerio 0 217
ENSDART00000102972 protein_coding Danio_rerio 0 217
ENSDART00000155501 protein_coding Danio_rerio 0 217
ENSDART00000126259 protein_coding Danio_rerio 0 215
ENSDART00000110632 protein_coding Danio_rerio 0 213
ENSDART00000108936 protein_coding Danio_rerio 0 211
ENSDART00000155060 protein_coding Danio_rerio 0 211
ENSDART00000129969 si:ch211-113a14.19-001 protein_coding Danio_rerio 0 209
ENSDART00000073454 protein_coding Danio_rerio 0 209
ENSDART00000073402 protein_coding Danio_rerio 0 209
ENSDART00000103013 si:ch211-113a14.19-001 protein_coding Danio_rerio 0 209
ENSDART00000114908 protein_coding Danio_rerio 0 206
ENSDART00000147978 protein_coding Danio_rerio 0 206
ENSDART00000103006 protein_coding Danio_rerio 0 198
ENSDART00000129239 protein_coding Danio_rerio 0 198
ENSDART00000129403 protein_coding Danio_rerio 0 189
ENSDART00000115109 protein_coding Danio_rerio 1.00053e-42 176
ENST00000314088 HIST1H2AC-001 nonsense_mediated_decay Homo_sapiens 0 305
ENST00000333151 HIST1H2AJ-001 protein_coding Homo_sapiens 0 287
ENST00000341023 HIST1H2AD-001 protein_coding Homo_sapiens 0 267
ENST00000358739 HIST1H2AI-001 protein_coding Homo_sapiens 0 307
ENST00000359193 HIST1H2AG-001 protein_coding Homo_sapiens 0 289
ENST00000359611 HIST1H2AM-001 protein_coding Homo_sapiens 0 274
ENST00000366695 HIST3H2A-001 protein_coding Homo_sapiens 0 344
ENST00000375167 H2AFX-002 nonsense_mediated_decay Homo_sapiens 0 296
ENST00000377459 HIST1H2AH-001 protein_coding Homo_sapiens 0 272
ENST00000377791 HIST1H2AC-201 protein_coding Homo_sapiens 0 305
ENST00000389078 H2AFJ-005 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000406683 HIST1H2APS1-001 processed_pseudogene Homo_sapiens 0 195
ENST00000479986 HIST1H3J-002 processed_transcript Homo_sapiens 0 274
ENST00000501744 H2AFJ-002 nonsense_mediated_decay Homo_sapiens 0 244
ENST00000530167 H2AFX-001 protein_coding Homo_sapiens 0 296
ENST00000544848 H2AFJ-001 protein_coding Homo_sapiens 0 244
ENST00000602637 HIST1H2AC-002 protein_coding Homo_sapiens 0 305
ENST00000612898 HIST1H2BN-001 protein_coding Homo_sapiens 0 289
ENST00000613174 HIST1H2AL-001 protein_coding Homo_sapiens 0 305
ENST00000618958 HIST1H2AK-001 protein_coding Homo_sapiens 0 289

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