Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	heterogeneous nuclear ribonucleoprotein A1 pseudogene 66
ENST00000416539	HNRNPA1P66-001	ENSG00000229221	9606	-	2:63751697-63752630	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Heart	Kidney	Liver	Muscle	Ovary	Placenta	Testis
ENST00000416539	0.066±0.00	0.028±0.00	0.042±0.00	0.473±0.07	0.136±0.01	0.508±0.39	0.025±0.00	0.244±0.04	0.015±0.00	0.040±0.00	0.150±0.13

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_000100	CIL_000100_0002	CGP	2:63050057-63827843
CIL_000105	CIL_000105_0002	CGP	2:63588609-63891562

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000168019	Gm10052-001	processed_pseudogene	Mus_musculus	0	869
ENSMUST00000117081	Gm5643-001	processed_pseudogene	Mus_musculus	0	869
ENSMUST00000087351	Hnrnpa1-202	protein_coding	Mus_musculus	0	869
ENSMUST00000022493	Gm5803-001	processed_pseudogene	Mus_musculus	0	830
ENSMUST00000181363	Gm8652-001	processed_pseudogene	Mus_musculus	0	797
ENSMUST00000129154	Hnrnpa1l2-ps-001	processed_pseudogene	Mus_musculus	0	771
ENSMUST00000050143	Gm7729-001	unprocessed_pseudogene	Mus_musculus	0	717
ENSMUST00000036004	Hnrnpa1-201	protein_coding	Mus_musculus	0	706
ENSMUST00000118970	Gm16216-001	processed_pseudogene	Mus_musculus	0	673
ENSMUST00000184038	Gm5269-001	translated_processed_pseudogene	Mus_musculus	0	566
ENSMUST00000178732	RP24-383H12.1-001	processed_pseudogene	Mus_musculus	0	494
ENSMUST00000119387	Gm12458-001	processed_pseudogene	Mus_musculus	0	385
ENSMUST00000189260	RP23-389M9.4-001	processed_pseudogene	Mus_musculus	0	381
ENSMUST00000122005	Gm12382-001	processed_pseudogene	Mus_musculus	0	357

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