C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein SA pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416785 RPSAP2-001 ENSG00000237425 9606 + 6:28732017-28732904 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverLungOvaryPlacentaTestisENST00000416785
Transcript ID Adrenal Brain Heart Liver Lung Ovary Placenta Testis
ENST00000416785 0.056±0.00 0.020±0.00 0.017±0.00 0.033±0.00 0.017±0.00 0.174±0.00 0.084±0.03 0.017±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 863
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 852
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 813
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 778
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 769
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 562

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