C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421426 HNRNPA1P33-001 ENSG00000213412 9606 + 10:46415853-46416413 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000421426
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000421426 0.222±0.00 0.307±0.00 0.053±0.00 0.490±0.00 0.199±0.13 0.162±0.00 0.077±0.00 0.367±0.02 0.619±0.40 0.045±0.00 0.291±0.14 1.244±0.25 0.530±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000RD CIL_0000RD_0001 CGP 10:46375627-46537864

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 719
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 686
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 595
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 564
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 451
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 448
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 442
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 339

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