C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428316 RP4-747G18.5-001 ENSG00000213394 9606 - 7:101203614-101204495 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000428316
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000428316 0.115±0.00 0.266±0.00 0.022±0.00 0.193±0.00 0.117±0.00 0.018±0.00 0.062±0.00 0.163±0.04 0.098±0.00 0.052±0.00 0.137±0.08 0.074±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 987
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 976
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 948
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 926
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 869
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 859
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 845
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 843
ENSMUST00000120514 Gm9097-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000117607 Gm9095-001 processed_pseudogene Mus_musculus 0 736
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 651
ENSMUST00000121121 Gm14666-001 processed_pseudogene Mus_musculus 0 348

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