C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460716 RPL5P1-001 ENSG00000241061 9606 - 15:24908932-24909825 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000460716
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000460716 0.119±0.00 0.123±0.00 0.096±0.00 0.133±0.00 0.138±0.00 0.078±0.02 0.082±0.00 0.097±0.06 0.051±0.00 0.123±0.00 0.085±0.08 0.099±0.06

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 1116
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 1116
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 1116
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 1077
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 1061
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 806
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 676
ENSMUST00000169624 Gm19840-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 283

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