C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474761 CTD-2377D24.2-001 ENSG00000244559 9606 - 17:48690481-48690624 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLungENST00000474761
Transcript ID Brain Lung
ENST00000474761 0.271±0.00 0.251±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0001 VISTA 17:48304888-48905406

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000140507 Rpl9-ps7-001 processed_pseudogene Mus_musculus 1e-38 161
ENSMUST00000075549 Rpl9-ps4-201 processed_pseudogene Mus_musculus 6e-37 156
ENSMUST00000080545 Gm5451-201 processed_pseudogene Mus_musculus 6e-37 156
ENSMUST00000120094 Rpl9-007 protein_coding Mus_musculus 6e-37 156
ENSMUST00000118543 Rpl9-006 protein_coding Mus_musculus 6e-37 156
ENSMUST00000150815 Rpl9-005 retained_intron Mus_musculus 6e-37 156
ENSMUST00000147660 Rpl9-004 retained_intron Mus_musculus 6e-37 156
ENSMUST00000127874 Rpl9-003 protein_coding Mus_musculus 6e-37 156
ENSMUST00000128074 Rpl9-002 retained_intron Mus_musculus 6e-37 156
ENSMUST00000057885 Rpl9-001 protein_coding Mus_musculus 6e-37 156
ENSMUST00000078034 Rpl9-ps6-201 protein_coding Mus_musculus 6e-37 156
ENSMUST00000117292 Gm15516-001 processed_pseudogene Mus_musculus 3e-35 150
ENSMUST00000077111 RP23-4E15.2-001 processed_pseudogene Mus_musculus 1e-29 132
ENSMUST00000120358 Gm15037-001 processed_pseudogene Mus_musculus 8e-26 119
ENSMUST00000120090 Gm14231-001 processed_pseudogene Mus_musculus 3e-20 100
ENSMUST00000140879 Rpl9-010 retained_intron Mus_musculus 0.000000000002 75

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