C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5451
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080545 Gm5451-201 ENSMUSG00000095847 10090 + 13:66874081-66874659 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000080545
Transcript ID Adipose Bladder Brain Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000080545 0.229±0.00 0.273±0.15 0.068±0.03 0.162±0.00 0.077±0.01 0.119±0.05 0.113±0.00 0.078±0.02 0.049±0.02 0.071±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 730
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 730
ENST00000392269 RP11-256K7.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 736
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 0 497
ENST00000420684 AC009500.2-001 processed_pseudogene Homo_sapiens 0 270
ENST00000423843 AC093698.1-001 processed_pseudogene Homo_sapiens 0 575
ENST00000424673 RPL9P2-001 processed_pseudogene Homo_sapiens 0 440
ENST00000437992 RPL9-010 retained_intron Homo_sapiens 0 427
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 730
ENST00000454802 RP4-800M22.4-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 0 603
ENST00000463864 CTD-2290C23.1-001 processed_pseudogene Homo_sapiens 0 636
ENST00000464118 RPL9P32-001 processed_pseudogene Homo_sapiens 0 651
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 736
ENST00000472460 RP11-851M3.1-001 processed_pseudogene Homo_sapiens 0 475
ENST00000474761 CTD-2377D24.2-001 processed_pseudogene Homo_sapiens 6e-37 156
ENST00000489027 RP11-64K12.1-001 processed_pseudogene Homo_sapiens 0 564
ENST00000489563 RPL9P25-001 processed_pseudogene Homo_sapiens 0 662
ENST00000491923 RPL9P16-001 processed_pseudogene Homo_sapiens 0 435
ENST00000495117 RPL9P31-001 processed_pseudogene Homo_sapiens 0 399
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 632
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 664
ENST00000504470 RPL9-009 protein_coding Homo_sapiens 0 632
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 0 243
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 664
ENST00000511075 RPL9-006 retained_intron Homo_sapiens 0 494
ENST00000511084 CTB-85P21.1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000511643 RPL9-013 retained_intron Homo_sapiens 0 244
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 416
ENST00000561773 TIPIN-006 processed_transcript Homo_sapiens 0 662

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