C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140879 Rpl9-010 ENSMUSG00000047215 10090 - 5:65388365-65391398 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TV CIL_0002TV_0003 CGP 5:65388364-65410693

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 195
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 195
ENST00000392269 RP11-256K7.1-001 processed_pseudogene Homo_sapiens 5.00264e-43 178
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 200
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 0 195
ENST00000420684 AC009500.2-001 processed_pseudogene Homo_sapiens 0.000000001 68
ENST00000423843 AC093698.1-001 processed_pseudogene Homo_sapiens 6e-23 111
ENST00000424673 RPL9P2-001 processed_pseudogene Homo_sapiens 2e-23 113
ENST00000437992 RPL9-010 retained_intron Homo_sapiens 0 195
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 195
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 4e-30 135
ENST00000463864 CTD-2290C23.1-001 processed_pseudogene Homo_sapiens 1e-25 121
ENST00000464118 RPL9P32-001 processed_pseudogene Homo_sapiens 9.99995e-41 171
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 200
ENST00000472460 RP11-851M3.1-001 processed_pseudogene Homo_sapiens 6e-23 111
ENST00000474761 CTD-2377D24.2-001 processed_pseudogene Homo_sapiens 0.000000000002 75
ENST00000489027 RP11-64K12.1-001 processed_pseudogene Homo_sapiens 5.99756e-43 178
ENST00000489563 RPL9P25-001 processed_pseudogene Homo_sapiens 9.80909e-45 183
ENST00000491923 RPL9P16-001 processed_pseudogene Homo_sapiens 6e-23 111
ENST00000495117 RPL9P31-001 processed_pseudogene Homo_sapiens 0.000000001 68
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 189
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 0 195
ENST00000504470 RPL9-009 protein_coding Homo_sapiens 0 195
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 2e-30 135
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 0 195
ENST00000511075 RPL9-006 retained_intron Homo_sapiens 0 195
ENST00000511084 CTB-85P21.1-001 processed_pseudogene Homo_sapiens 3e-20 102
ENST00000511643 RPL9-013 retained_intron Homo_sapiens 4e-30 135
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 196
ENST00000561773 TIPIN-006 processed_transcript Homo_sapiens 1.96182e-44 183

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