C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15516
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117292 Gm15516-001 ENSMUSG00000082662 10090 - 14:45713132-45713324 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryPlacentaTestisENSMUST00000117292
Transcript ID Bladder Ovary Placenta Testis
ENSMUST00000117292 0.479±0.12 2.103±0.00 0.256±0.00 1.186±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086A CIL_00086A_0002 VISTA 14:45525150-46127947
CIL_0007SB CIL_0007SB_0002 VISTA 14:45643840-46245127

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295955 RPL9-001 protein_coding Homo_sapiens 0 241
ENST00000330965 RPL9P7-001 processed_pseudogene Homo_sapiens 0 241
ENST00000393394 RPL9-201 protein_coding Homo_sapiens 0 241
ENST00000418824 UBE2Q2P6-002 processed_transcript Homo_sapiens 0 241
ENST00000437992 RPL9-010 retained_intron Homo_sapiens 6.99949e-42 174
ENST00000449470 RPL9-002 protein_coding Homo_sapiens 0 241
ENST00000461606 RPL9P28-001 processed_pseudogene Homo_sapiens 0 206
ENST00000463864 CTD-2290C23.1-001 processed_pseudogene Homo_sapiens 0 230
ENST00000464118 RPL9P32-001 processed_pseudogene Homo_sapiens 0 224
ENST00000466501 UBE2Q2P6-001 transcribed_processed_pseudogene Homo_sapiens 0 241
ENST00000474761 CTD-2377D24.2-001 processed_pseudogene Homo_sapiens 3e-35 150
ENST00000503040 RPL9-011 protein_coding Homo_sapiens 0 241
ENST00000503277 RPL9-008 retained_intron Homo_sapiens 9.99967e-42 174
ENST00000504470 RPL9-009 protein_coding Homo_sapiens 0 241
ENST00000506581 RPL9-012 protein_coding Homo_sapiens 0.0000001 60
ENST00000508595 RPL9-007 protein_coding Homo_sapiens 9.00054e-42 174
ENST00000511075 RPL9-006 retained_intron Homo_sapiens 0 241
ENST00000514842 RPL9-005 retained_intron Homo_sapiens 0 241

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