C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 8816
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182280 Gm8816-001 ENSMUSG00000098115 10090 + 6:130567639-130568801 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000182280
Transcript ID Ovary
ENSMUST00000182280 0.022±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253363 RBM39-002 protein_coding Homo_sapiens 0 920
ENST00000338163 RBM39-008 nonsense_mediated_decay Homo_sapiens 0 774
ENST00000361162 RBM39-001 protein_coding Homo_sapiens 0 998
ENST00000374038 RBM39-020 protein_coding Homo_sapiens 0 377
ENST00000397254 RP6-218J18.2-001 processed_pseudogene Homo_sapiens 0 819
ENST00000403542 RBM39-006 nonsense_mediated_decay Homo_sapiens 0 920
ENST00000412738 RBM39-017 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000429968 RBM39-005 nonsense_mediated_decay Homo_sapiens 0 920
ENST00000434927 RBM39-018 protein_coding Homo_sapiens 0 248
ENST00000444878 RBM39-007 nonsense_mediated_decay Homo_sapiens 0 998
ENST00000448303 RBM39-035 protein_coding Homo_sapiens 0 431
ENST00000461283 RBM39-009 retained_intron Homo_sapiens 0 998
ENST00000463004 RBM39-004 retained_intron Homo_sapiens 0 920
ENST00000465158 RBM39-031 retained_intron Homo_sapiens 0 300
ENST00000470563 RBM39-027 processed_transcript Homo_sapiens 1.00053e-42 176
ENST00000471635 RBM39-030 retained_intron Homo_sapiens 0.000000001 68
ENST00000475651 RBM39-028 retained_intron Homo_sapiens 0 316
ENST00000476806 RBM39-029 nonsense_mediated_decay Homo_sapiens 1e-30 137
ENST00000490484 RBM39-036 retained_intron Homo_sapiens 0 603
ENST00000492779 RBM39-010 retained_intron Homo_sapiens 0 920
ENST00000494274 RBM39-040 processed_transcript Homo_sapiens 0 558
ENST00000495293 RBM39-032 retained_intron Homo_sapiens 0 248
ENST00000528062 RBM39-015 protein_coding Homo_sapiens 0 913
ENST00000615771 RBM39-047 processed_transcript Homo_sapiens 0 399

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