Transcript Info |
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Description: | RNA binding motif protein 39 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000142071 | Rbm39-026 | ENSMUSG00000027620 | 10090 | - | 2:156147249-156180149 | nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0008EI | CIL_0008EI_0002 | VISTA | 2:155562263-156164147 |
CIL_0000WY | CIL_0000WY_0002 | CGP | 2:156144039-156180238 |
CIL_0000X2 | CIL_0000X2_0002 | CGP | 2:156147239-156309952 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000166 | IEA | nucleotide binding |
GO:0003713 | TAS | transcription coactivator activity |
GO:0003723 | IEA | RNA binding |
GO:0005515 | IPI | protein binding |
GO:0005634 | TAS | nucleus |
GO:0006351 | TAS | transcription, DNA-templated |
GO:0006397 | IEA | mRNA processing |
GO:2001141 | TAS | regulation of RNA biosynthetic process |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENST00000253363 | RBM39-002 | protein_coding | Homo_sapiens | 0 | 1698 |
ENST00000338163 | RBM39-008 | nonsense_mediated_decay | Homo_sapiens | 0 | 3500 |
ENST00000361162 | RBM39-001 | protein_coding | Homo_sapiens | 0 | 1962 |
ENST00000374038 | RBM39-020 | protein_coding | Homo_sapiens | 0 | 1203 |
ENST00000397254 | RP6-218J18.2-001 | processed_pseudogene | Homo_sapiens | 0 | 1480 |
ENST00000397370 | RBM39-013 | protein_coding | Homo_sapiens | 0 | 403 |
ENST00000403542 | RBM39-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 1600 |
ENST00000412738 | RBM39-017 | nonsense_mediated_decay | Homo_sapiens | 0 | 800 |
ENST00000416108 | RBM39-043 | nonsense_mediated_decay | Homo_sapiens | 0 | 412 |
ENST00000416529 | RBM39-024 | nonsense_mediated_decay | Homo_sapiens | 1e-24 | 117 |
ENST00000425184 | RBM39-021 | nonsense_mediated_decay | Homo_sapiens | 0 | 601 |
ENST00000426951 | RBM39-039 | protein_coding | Homo_sapiens | 0 | 331 |
ENST00000429968 | RBM39-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 1513 |
ENST00000433027 | RBM39-045 | nonsense_mediated_decay | Homo_sapiens | 0 | 399 |
ENST00000434927 | RBM39-018 | protein_coding | Homo_sapiens | 0 | 833 |
ENST00000442447 | RBM39-016 | processed_transcript | Homo_sapiens | 0 | 335 |
ENST00000444878 | RBM39-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 1646 |
ENST00000448303 | RBM39-035 | protein_coding | Homo_sapiens | 0 | 638 |
ENST00000449489 | RBM39-044 | nonsense_mediated_decay | Homo_sapiens | 3e-19 | 99 |
ENST00000453310 | RBM39-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 322 |
ENST00000455343 | RBM39-019 | nonsense_mediated_decay | Homo_sapiens | 0 | 315 |
ENST00000461283 | RBM39-009 | retained_intron | Homo_sapiens | 0 | 1644 |
ENST00000461849 | RBM39-014 | retained_intron | Homo_sapiens | 0 | 322 |
ENST00000463004 | RBM39-004 | retained_intron | Homo_sapiens | 0 | 1598 |
ENST00000463098 | RBM39-003 | processed_transcript | Homo_sapiens | 0 | 322 |
ENST00000465158 | RBM39-031 | retained_intron | Homo_sapiens | 0 | 704 |
ENST00000470563 | RBM39-027 | processed_transcript | Homo_sapiens | 0 | 226 |
ENST00000475651 | RBM39-028 | retained_intron | Homo_sapiens | 0 | 523 |
ENST00000476806 | RBM39-029 | nonsense_mediated_decay | Homo_sapiens | 0 | 917 |
ENST00000477334 | RBM39-026 | retained_intron | Homo_sapiens | 0 | 313 |
ENST00000481037 | RBM39-022 | retained_intron | Homo_sapiens | 0 | 444 |
ENST00000482563 | RBM39-011 | retained_intron | Homo_sapiens | 0 | 466 |
ENST00000490354 | RBM39-034 | retained_intron | Homo_sapiens | 0 | 597 |
ENST00000490484 | RBM39-036 | retained_intron | Homo_sapiens | 0 | 935 |
ENST00000492779 | RBM39-010 | retained_intron | Homo_sapiens | 0 | 1513 |
ENST00000493853 | RBM39-042 | retained_intron | Homo_sapiens | 3e-21 | 106 |
ENST00000494274 | RBM39-040 | processed_transcript | Homo_sapiens | 0 | 883 |
ENST00000495293 | RBM39-032 | retained_intron | Homo_sapiens | 0 | 815 |
ENST00000496183 | RBM39-033 | retained_intron | Homo_sapiens | 0 | 745 |
ENST00000528062 | RBM39-015 | protein_coding | Homo_sapiens | 0 | 1170 |
ENST00000615771 | RBM39-047 | processed_transcript | Homo_sapiens | 0 | 647 |