C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chimerin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000488080 CHN1-004 ENSG00000128656 9606 - 2:174799495-175005364 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverOvaryENST00000488080
Transcript ID Colon Kidney Liver Ovary
ENST00000488080 1.523±0.00 1.035±0.00 0.474±0.00 0.630±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HC CIL_0001HC_0001 CGP 2:174747592-175005369
CIL_0001HB CIL_0001HB_0001 CGP 2:174799363-175168382

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102677 Chn1-002 protein_coding Mus_musculus 0 1541
ENSMUST00000180045 Chn1-202 protein_coding Mus_musculus 0 1539
ENSMUST00000112024 Chn1-001 protein_coding Mus_musculus 0 1539
ENSMUST00000166199 Chn1-201 protein_coding Mus_musculus 0 1046
ENSMUST00000070579 Chn1-003 protein_coding Mus_musculus 0 1005
ENSMUST00000139252 Chn1-004 nonsense_mediated_decay Mus_musculus 0 830
ENSMUST00000154258 Chn1-007 protein_coding Mus_musculus 0 610
ENSMUST00000124450 Chn1-006 nonsense_mediated_decay Mus_musculus 0 462
ENSMUST00000136953 Chn1-008 protein_coding Mus_musculus 0 422
ENSMUST00000135904 Chn1-005 protein_coding Mus_musculus 0 337

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