C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496040 RPL5P23-001 ENSG00000240395 9606 - 8:42341767-42342634 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryTestisENST00000496040
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000496040 0.138±0.00 0.282±0.00 0.164±0.00 0.164±0.00 0.043±0.02 0.051±0.00 0.034±0.00 0.233±0.07 0.080±0.00 0.050±0.01 0.103±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 929
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 929
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 929
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 885
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 874
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 701
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 582
ENSMUST00000169624 Gm19840-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 433
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 401
ENSMUST00000118779 Gm11313-001 processed_pseudogene Mus_musculus 0 342
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 219

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