C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 55
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000505935 HNRNPA1P55-001 ENSG00000249920 9606 - 4:73938604-73939558 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonKidneyMuscleOvaryPlacentaTestisENST00000505935
Transcript ID Adipose Adrenal Brain Colon Kidney Muscle Ovary Placenta Testis
ENST00000505935 0.110±0.00 0.087±0.00 0.015±0.00 0.040±0.00 0.029±0.00 0.051±0.00 0.029±0.01 0.057±0.00 0.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1140
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1138
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1098
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1068
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1057
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1037
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 872
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 861
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 1e-31 141

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