C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 17
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547505 EEF1A1P17-001 ENSG00000257907 9606 + 12:43659827-43661101 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000547505
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000547505 1.709±0.00 1.179±0.00 0.344±0.21 1.008±0.00 1.171±0.00 0.075±0.00 0.700±0.00 0.158±0.00 0.648±0.00 0.135±0.00 0.082±0.06 0.825±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R3 CIL_0006R3_0001 CGP 12:43353866-43758817

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1478
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1423
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1382
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1317
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 1273
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1195
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 1144
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 765
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 743
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 717
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 595
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 595
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 527
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 497
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 433
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 357

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