C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000128726 eef1a1a-001 ENSDARG00000039502 7955 + 13:27538685-27548637 protein_coding

Danio rerio EnsemblZv9

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000128726
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000128726 207.855±67.85 1.025±0.69 0.475±0.00 0.229±0.00 8.094±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003746 IEA translation elongation factor activity
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0006412 IEA translation
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1151
ENSMUST00000055990 Eef1a2-001 protein_coding Mus_musculus 0 1057
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1053
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 822
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 582
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 658
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 195
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 641
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 527
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 859
ENST00000325349 EEF1A1P16-001 processed_pseudogene Homo_sapiens 0 754
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 1048
ENST00000417549 EEF1A1P3-001 processed_pseudogene Homo_sapiens 0 773
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 1158
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 551
ENST00000451469 EEF1A1P24-001 processed_pseudogene Homo_sapiens 0 915
ENST00000475365 EEF1A1P10-001 processed_pseudogene Homo_sapiens 0 920
ENST00000503537 EEF1A1P13-001 processed_pseudogene Homo_sapiens 0 1098
ENST00000547505 EEF1A1P17-001 processed_pseudogene Homo_sapiens 0 765
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 865

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