C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000547890 KRT5-010 ENSG00000186081 9606 - 12:52516690-52517952 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleENST00000547890
Transcript ID Heart Muscle
ENST00000547890 0.042±0.00 0.082±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_000N CGP 12:52487174-52520687
CIL_00033Q CIL_00033Q_000K CGP 12:52514575-52553147

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 481
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 0 346
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 300
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 300
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 224
ENSMUST00000063292 Krt73-001 protein_coding Mus_musculus 0 207
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 204
ENSMUST00000077196 Krt80-201 protein_coding Mus_musculus 3e-32 143
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 3e-22 110
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 3e-22 110

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