C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557533 KRT8P1-001 ENSG00000258948 9606 + 14:38727275-38728481 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonKidneyLungENST00000557533
Transcript ID Brain Colon Kidney Lung
ENST00000557533 0.111±0.09 0.016±0.00 0.036±0.00 0.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003VV CIL_0003VV_0001 CGP 14:38254103-39109646

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 989
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 385
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 228
ENSDART00000065351 krt4-201 protein_coding Danio_rerio 0 226
ENSDART00000012644 krt4-001 protein_coding Danio_rerio 0 226
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 211
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 1e-28 132
ENSMUST00000023790 Krt1-201 protein_coding Mus_musculus 6e-16 90
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.00000001 66

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